The importance of the microbiome of the plant holobiont

Microbe–microbe interactions determine oomycete and fungal host colonization

(2014) Eric Kemen   CURRENT OPINION IN PLANT BIOLOGY

Selection for cheating across disparate environments in the legume-rhizobium mutualism

(2014) Stephanie S. Porter et al.   ECOLOGY LETTERS

Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative

(2014) Maggie R. Wagner et al.   ECOLOGY LETTERS

Root microbiome relates to plant host evolution in maize and other Poaceae

(2014) Marie-Lara Bouffaud et al.   ENVIRONMENTAL MICROBIOLOGY

The communities of tomato (Solanum lycopersicumL.) leaf endophytic bacteria, analyzed by 16S-ribosomal RNA gene pyrosequencing

(2014) Fernando M. Romero et al.   FEMS MICROBIOLOGY LETTERS

Selection on soil microbiomes reveals reproducible impacts on plant function

(2014) Kevin Panke-Buisse et al.   ISME Journal

Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants

(2014) Gregory Bonito et al.   MOLECULAR ECOLOGY

Evolution of microbial markets

(2014) G. D. A. Werner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The foliar microbiome

(2014) Josep Peñuelas et al.   TRENDS IN PLANT SCIENCE

Niche and host-associated functional signatures of the root surface microbiome

(2014) Maya Ofek-Lalzar et al.   Nature Communications

A Synthetic Community Approach Reveals Plant Genotypes Affecting the Phyllosphere Microbiota

(2014) Natacha Bodenhausen et al.   PLoS Genetics

Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce

(2014) Susanne Schreiter et al.   Frontiers in Microbiology

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Host signature effect on plant root-associated microbiomes revealed through analyses of residentvs. active communities

(2013) Maya Ofek et al.   ENVIRONMENTAL MICROBIOLOGY

Detection and quantification of native microbial populations on soil-grown rice roots by catalyzed reporter deposition-fluorescencein situhybridization

(2013) Hannes Schmidt et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of the spinach (Spinacia oleracea) spermosphere and phyllosphere bacterial communities

(2013) Gabriela Lopez-Velasco et al.   FEMS MICROBIOLOGY LETTERS

Detection of a novel intracellular microbiome hosted in arbuscular mycorrhizal fungi

(2013) Alessandro Desirò et al.   ISME Journal

Diffuse symbioses: roles of plant-plant, plant-microbe and microbe-microbe interactions in structuring the soil microbiome

(2013) Matthew G. Bakker et al.   MOLECULAR ECOLOGY

Belowground biotic complexity drives aboveground dynamics: a test of the soil community feedback model

(2013) Thomas H. Pendergast et al.   NEW PHYTOLOGIST

Facilitation as a ubiquitous driver of biodiversity

(2013) Eliot J. B. McIntire et al.   NEW PHYTOLOGIST

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana

(2013) Natacha Bodenhausen et al.   PLoS One

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

(2013) Migun Shakya et al.   PLoS One

Fungal Endophyte (Epichloë festucae) Alters the Nutrient Content of Festuca rubra Regardless of Water Availability

(2013) Beatriz R. Vázquez-de-Aldana et al.   PLoS One

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rethinking Mutualism Stability: Cheaters and the Evolution of Sanctions

(2013) Megan E. Frederickson   QUARTERLY REVIEW OF BIOLOGY

Sustainable agriculture: possible trajectories from mutualistic symbiosis and plant neodomestication

(2013) Marie Duhamel et al.   TRENDS IN PLANT SCIENCE

Small RNAs in plant defense responses during viral and bacterial interactions: similarities and differences

(2013) Pablo Peláez et al.   Frontiers in Plant Science

Symbiosis and the social network of higher plants

(2012) Muthusubramanian Venkateshwaran et al.   CURRENT OPINION IN PLANT BIOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

Widespread fitness alignment in the legume-rhizobium symbiosis

(2012) Maren L. Friesen   NEW PHYTOLOGIST

Selective recruitment of mRNAs and miRNAs to polyribosomes in response to rhizobia infection inMedicago truncatula

(2012) Mauricio Alberto Reynoso et al.   PLANT JOURNAL

Two MicroRNAs Linked to Nodule Infection and Nitrogen-Fixing Ability in the Legume Lotus japonicus

(2012) A. De Luis et al.   PLANT PHYSIOLOGY

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Bacterial anoxygenic photosynthesis on plant leaf surfaces

(2012) Nof Atamna-Ismaeel et al.   Environmental Microbiology Reports

The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

(2012) J. J. Morris et al.   mBio

Hormonal Modulation of Plant Immunity

(2011) Corné M.J. Pieterse et al.   Annual Review of Cell and Developmental Biology

Microbially Mediated Plant Functional Traits

(2011) Maren L. Friesen et al.   Annual Review of Ecology Evolution and Systematics

A Secreted Effector Protein of Laccaria bicolor Is Required for Symbiosis Development

(2011) Jonathan M. Plett et al.   CURRENT BIOLOGY

A Secreted Fungal Effector of Glomus intraradices Promotes Symbiotic Biotrophy

(2011) Silke Kloppholz et al.   CURRENT BIOLOGY

Living inside plants: bacterial endophytes

(2011) Barbara Reinhold-Hurek et al.   CURRENT OPINION IN PLANT BIOLOGY

Microbial rhodopsins on leaf surfaces of terrestrial plants

(2011) Nof Atamna-Ismaeel et al.   ENVIRONMENTAL MICROBIOLOGY

Modulation of Host Immunity by Beneficial Microbes

(2011) Christos Zamioudis et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Ectomycorrhizal fungi: the symbiotic route to the root for phosphorus in forest soils

(2011) John W. G. Cairney   PLANT AND SOIL

Evolutionary transitions in bacterial symbiosis

(2011) J. L. Sachs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial community assembly based on functional genes rather than species

(2011) C. Burke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reciprocal Rewards Stabilize Cooperation in the Mycorrhizal Symbiosis

(2011) E. T. Kiers et al.   SCIENCE

Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere

(2010) Claudia Knief et al.   ISME Journal

Pyrosequencing Reveals a Highly Diverse and Cultivar-Specific Bacterial Endophyte Community in Potato Roots

(2010) Daniel K. Manter et al.   MICROBIAL ECOLOGY

The role of ectomycorrhizal communities in forest ecosystem processes: New perspectives and emerging concepts

(2010) Pierre-Emmanuel Courty et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil

(2010) Stéphane Uroz et al.   Environmental Microbiology Reports

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

A Renaissance of Elicitors: Perception of Microbe-Associated Molecular Patterns and Danger Signals by Pattern-Recognition Receptors

(2009) Thomas Boller et al.   Annual Review of Plant Biology

Rhizobitoxine producers gain more poly-3-hydroxybutyrate in symbiosis than do competing rhizobia, but reduce plant growth

(2009) William C Ratcliff et al.   ISME Journal

Weights in the Balance: Jasmonic Acid and Salicylic Acid Signaling in Root-Biotroph Interactions

(2009) Caroline Gutjahr et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors

(2009) M. Buée et al.   PLANT AND SOIL

Effects of plant genotype and growth stage on the structure of bacterial communities associated with potato (Solanum tuberosum L.)

(2008) Leo Van Overbeek et al.   FEMS MICROBIOLOGY ECOLOGY

Stress tolerance in plants via habitat-adapted symbiosis

(2008) Rusty J Rodriguez et al.   ISME Journal

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY