标题
Protists are an integral part of the Arabidopsis thaliana
microbiome
作者
关键词
-
出版物
ENVIRONMENTAL MICROBIOLOGY
Volume 20, Issue 1, Pages 30-43
出版商
Wiley
发表日期
2017-10-02
DOI
10.1111/1462-2920.13941
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Grazing of leaf-associated Cercomonads (Protists: Rhizaria: Cercozoa) structures bacterial community composition and function
- (2017) Sebastian Flues et al. ENVIRONMENTAL MICROBIOLOGY
- Oomycete Species Associated with Soybean Seedlings in North America—Part II: Diversity and Ecology in Relation to Environmental and Edaphic Factors
- (2017) J. Alejandro Rojas et al. PHYTOPATHOLOGY
- Microbial Partnerships of Pathogenic Oomycetes
- (2017) Marie Larousse et al. PLoS Pathogens
- Pythium recalcitrans sp. nov. revealed by multigene phylogenetic analysis
- (2017) Eduardo Moralejo et al. MYCOLOGIA
- The Plant Microbiota: Systems-Level Insights and Perspectives
- (2016) Daniel B. Müller et al. Annual Review of Genetics
- Coprophilic amoebae and flagellates, including Guttulinopsis, Rosculus and Helkesimastix, characterise a divergent and diverse rhizarian radiation and contribute to a large diversity of faecal-associated protists
- (2016) David Bass et al. ENVIRONMENTAL MICROBIOLOGY
- High-throughput sequencing reveals diverse oomycete communities in oligotrophic peat bog micro-habitat
- (2016) David Singer et al. Fungal Ecology
- Local diversity of heathland Cercozoa explored by in-depth sequencing
- (2016) Christoffer Bugge Harder et al. ISME Journal
- High Diversity Revealed in Leaf-Associated Protists (Rhizaria: Cercozoa) of Brassicaceae
- (2016) Sebastian Ploch et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Plant root-microbe communication in shaping root microbiomes
- (2016) Andrew Lareen et al. PLANT MOLECULAR BIOLOGY
- Description of Lecythium terrestris sp. nov. (Chlamydophryidae, Cercozoa), a Soil Dwelling Protist Feeding on Fungi and Algae
- (2016) Kenneth Dumack et al. PROTIST
- A Novel Lineage of ‘Naked Filose Amoebae’; Kraken carinae gen. nov. sp. nov. (Cercozoa) with a Remarkable Locomotion by Disassembly of its Cell Body
- (2016) Kenneth Dumack et al. PROTIST
- Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation
- (2016) Matthew T. Agler et al. PLOS BIOLOGY
- Plant Pathogens Affecting the Establishment of Plant-Symbiont Interaction
- (2016) Eduardo M. de Souza et al. Frontiers in Plant Science
- Vernalophrys algivore gen. nov., sp. nov. (Rhizaria: Cercozoa: Vampyrellida), a New Algal Predator Isolated from Outdoor Mass Culture of Scenedesmus dimorphus
- (2015) Yingchun Gong et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Error filtering, pair assembly and error correction for next-generation sequencing reads
- (2015) Robert C. Edgar et al. BIOINFORMATICS
- Metatranscriptomic census of active protists in soils
- (2015) Stefan Geisen et al. ISME Journal
- Tree diversity and species identity effects on soil fungi, protists and animals are context dependent
- (2015) Leho Tedersoo et al. ISME Journal
- An improved high throughput sequencing method for studying oomycete communities
- (2015) Rumakanta Sapkota et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Oomycete Interactions with Plants: Infection Strategies and Resistance Principles
- (2015) Stuart Fawke et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Microbiomes: Curating communities from plants
- (2015) Gwyn A. Beattie NATURE
- The importance of the microbiome of the plant holobiont
- (2015) Philippe Vandenkoornhuyse et al. NEW PHYTOLOGIST
- Pivotal roles of phyllosphere microorganisms at the interface between plant functioning and atmospheric trace gas dynamics
- (2015) Françoise Bringel et al. Frontiers in Microbiology
- Nestedness for Dummies (NeD): A User-Friendly Web Interface for Exploratory Nestedness Analysis
- (2015) Giovanni Strona et al. Journal of Statistical Software
- Cross-kingdom host shifts of phytomyxid parasites
- (2014) Sigrid Neuhauser et al. BMC EVOLUTIONARY BIOLOGY
- Rhizaria
- (2014) Fabien Burki et al. CURRENT BIOLOGY
- Spatial structuring of bacterial communities within individualGinkgo bilobatrees
- (2014) Jonathan W. Leff et al. ENVIRONMENTAL MICROBIOLOGY
- A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses
- (2014) Pier Luigi Buttigieg et al. FEMS MICROBIOLOGY ECOLOGY
- One stop shop: backbones trees for important phytopathogenic genera: I (2014)
- (2014) Kevin D. Hyde et al. FUNGAL DIVERSITY
- Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
- (2014) Guillaume Lentendu et al. MOLECULAR ECOLOGY
- Analysis, Optimization and Verification of Illumina-Generated 16S rRNA Gene Amplicon Surveys
- (2014) Michael C. Nelson et al. PLoS One
- Ultrastructure of the Algivorous Amoeboflagellate Viridiraptor invadens (Glissomonadida, Cercozoa)
- (2014) Sebastian Hess et al. PROTIST
- Enrichment of specific bacterial and eukaryotic microbes in the rhizosphere of switchgrass (Panicum virgatum L.) through root exudates
- (2014) Yuejian Mao et al. Environmental Microbiology Reports
- Unraveling the plant microbiome: looking back and future perspectives
- (2014) Gabriele Berg et al. Frontiers in Microbiology
- Structure and Functions of the Bacterial Microbiota of Plants
- (2013) Davide Bulgarelli et al. Annual Review of Plant Biology
- Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
- (2013) James J. Kozich et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Biological control of plant pathogens: advantages and limitations seen through the case study of Pythium oligandrum
- (2013) J. Gerbore et al. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
- UPARSE: highly accurate OTU sequences from microbial amplicon reads
- (2013) Robert C Edgar NATURE METHODS
- Going back to the roots: the microbial ecology of the rhizosphere
- (2013) Laurent Philippot et al. NATURE REVIEWS MICROBIOLOGY
- The Mystery of Clade X: Orciraptor gen. nov. and Viridiraptor gen. nov. are Highly Specialised, Algivorous Amoeboflagellates (Glissomonadida, Cercozoa)
- (2013) Sebastian Hess et al. PROTIST
- The rhizosphere revisited: root microbiomics
- (2013) Peter A. H. M. Bakker et al. Frontiers in Plant Science
- Mechanisms and Evolution of Virulence in Oomycetes
- (2012) Rays H.Y. Jiang et al. Annual Review of Phytopathology
- On the meanings of nestedness: back to the basics
- (2012) Werner Ulrich et al. ECOGRAPHY
- Eukaryotes in Arctic and Antarctic cyanobacterial mats
- (2012) Anne D. Jungblut et al. FEMS MICROBIOLOGY ECOLOGY
- A fine line – endophytes or pathogens in Arabidopsis thaliana
- (2012) Corina Junker et al. Fungal Ecology
- Global biogeography of highly diverse protistan communities in soil
- (2012) Scott T Bates et al. ISME Journal
- Pyrosequencing as a tool for the detection ofPhytophthoraspecies: error rate and risk of false Molecular Operational Taxonomic Units
- (2012) A.M. Vettraino et al. LETTERS IN APPLIED MICROBIOLOGY
- Defining the core Arabidopsis thaliana root microbiome
- (2012) Derek S. Lundberg et al. NATURE
- Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
- (2012) Davide Bulgarelli et al. NATURE
- Molecular Detection and Quantification ofPythiumSpecies: Evolving Taxonomy, New Tools, and Challenges
- (2012) Kurtis L. Schroeder et al. PLANT DISEASE
- The rhizosphere microbiome and plant health
- (2012) Roeland L. Berendsen et al. TRENDS IN PLANT SCIENCE
- Incorporation of plant residue-derived carbon into the microeukaryotic community in a rice field soil revealed by DNA stable-isotope probing
- (2011) Jun Murase et al. FEMS MICROBIOLOGY ECOLOGY
- Molecular analyses of Pythium irregulare isolates from grapevines in South Africa suggest a single variable species
- (2011) Christoffel F.J. Spies et al. Fungal Biology
- Fifty years of oomycetes—from consolidation to evolutionary and genomic exploration
- (2011) C. André Lévesque FUNGAL DIVERSITY
- Occurrence and diversity of free-living protozoa on butterhead lettuce
- (2011) Mario J.M. Vaerewijck et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer
- (2011) GREGG P. ROBIDEAU et al. Molecular Ecology Resources
- Novel Cultured Protists Identify Deep-branching Environmental DNA Clades of Cercozoa: New Genera Tremula, Micrometopion, Minimassisteria, Nudifila, Peregrinia
- (2011) Alexis T. Howe et al. PROTIST
- New Genera, Species, and Improved Phylogeny of Glissomonadida (Cercozoa)
- (2011) Alexis T. Howe et al. PROTIST
- The evolutionary phylogeny of the oomycete “fungi”
- (2011) Gordon W. Beakes et al. PROTOPLASMA
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Closely related protist strains have different grazing impacts on natural bacterial communities
- (2010) Edvard Glücksman et al. ENVIRONMENTAL MICROBIOLOGY
- Phylogeny of the genus Pythium and description of new genera
- (2010) Shihomi Uzuhashi et al. MYCOSCIENCE
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Salisapiliaceae – a new family of oomycetes from marsh grass litter of southeastern north America
- (2010) J. Hulvey et al. PERSOONIA
- Soil amoebae rapidly change bacterial community composition in the rhizosphere of Arabidopsis thaliana
- (2009) Katja Rosenberg et al. ISME Journal
- Molecular Biology of Plasmodiophora brassicae
- (2009) Johannes Siemens et al. JOURNAL OF PLANT GROWTH REGULATION
- A new species of Albugo parasitic to Arabidopsis thaliana reveals new evolutionary patterns in white blister rusts (Albuginaceae)
- (2009) M. Thines et al. PERSOONIA
- Soil bacteria and protozoa affect root branching via effects on the auxin and cytokinin balance in plants
- (2009) K. Krome et al. PLANT AND SOIL
- Phylogeny, Taxonomy, and Astounding Genetic Diversity of Glissomonadida ord. nov., The Dominant Gliding Zooflagellates in Soil (Protozoa: Cercozoa)
- (2009) Alexis T. Howe et al. PROTIST
- Phylogeny and Classification of Cercomonadida (Protozoa, Cercozoa): Cercomonas, Eocercomonas, Paracercomonas, and Cavernomonas gen. nov.
- (2009) David Bass et al. PROTIST
- Grazing of protozoa on rhizosphere bacteria alters growth and reproduction of Arabidopsis thaliana
- (2009) Kristin Krome et al. SOIL BIOLOGY & BIOCHEMISTRY
- Evidence for the importance of enzymatic digestion of epidermal walls during subepidermal sporulation and pustule opening in white blister rusts (Albuginaceae)
- (2009) Annerose Heller et al.
- Elevated atmospheric CO2affects soil microbial diversity associated with trembling aspen
- (2008) Celine Lesaulnier et al. ENVIRONMENTAL MICROBIOLOGY
- Natural history of Arabidopsis thaliana and oomycete symbioses
- (2008) Eric B. Holub EUROPEAN JOURNAL OF PLANT PATHOLOGY
- Secondary metabolite production facilitates establishment of rhizobacteria by reducing both protozoan predation and the competitive effects of indigenous bacteria
- (2008) A. Jousset et al. FUNCTIONAL ECOLOGY
- Phylogeny of Novel Naked Filose and Reticulose Cercozoa: Granofilosea cl. n. and Proteomyxidea Revised
- (2008) David Bass et al. PROTIST
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