Transcriptional responses of soybean roots to colonization with the root endophytic fungus Piriformospora indica reveals altered phenylpropanoid and secondary metabolism

Exploring Morphological and Biochemical Linkages in Fungal Growth with Label-Free Light Sheet Microscopy and Raman Spectroscopy

(2016) Soumik Siddhanta et al.   CHEMPHYSCHEM

Arbuscular mycorrhiza detoxifying response against arsenic and pathogenic fungus in soybean

(2016) Federico N. Spagnoletti et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Ectopic expression of a tobacco vacuolar invertase inhibitor in guard cells confers drought tolerance in Arabidopsis

(2016) Su-Fen Chen et al.   JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY

Sebacinales - one thousand and one interactions with land plants

(2016) Michael Weiß et al.   NEW PHYTOLOGIST

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Induced-differential changes on lignan and phenolic acid compounds in Linum album hairy roots by fungal extract of Piriformospora indica

(2016) Hannaneh Tashackori et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Study of Acid Phosphatase in Solubilization of Inorganic Phosphates by Piriformospora indica

(2016) Seshagiri Swetha et al.   Polish Journal of Microbiology

Nodulation ability in different genotypes of Phaseolus lunatus by rhizobia from California agricultural soils

(2016) Ademir Sérgio Ferreira de Araujo et al.   SYMBIOSIS

Dual symbiosis between Piriformospora indica and Azotobacter chroococcum enhances the artemisinin content in Artemisia annua L.

(2016) Monika Arora et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

The cell biology of lignification in higher plants

(2015) Jaime Barros et al.   ANNALS OF BOTANY

The beneficial root endophyte Piriformospora indica reduces egg density of the soybean cyst nematode

(2015) Ruchika Bajaj et al.   BIOLOGICAL CONTROL

WRKY6 restricts Piriformospora indica-stimulated and phosphate-induced root development in Arabidopsis

(2015) Madhunita Bakshi et al.   BMC PLANT BIOLOGY

Sustained exposure to abscisic acid enhances the colonization potential of the mutualist fungusPiriformospora indicaonArabidopsis thalianaroots

(2015) Tatjana Peskan-Berghöfer et al.   NEW PHYTOLOGIST

Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity

(2015) Urs Lahrmann et al.   NEW PHYTOLOGIST

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Phosphate utilization by the fungal root endophyte Piriformospora indica

(2015) B. Ngwene et al.   PLANT AND SOIL

Bioaugmentation of Mesorhizobium cicer, Pseudomonas spp. and Piriformospora indica for Sustainable Chickpea Production

(2015) Pallavi Mansotra et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Identification of salt-tolerant barley varieties by a consolidated physiological and molecular approach

(2014) Atul Kamboj et al.   ACTA PHYSIOLOGIAE PLANTARUM

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The role of inoculum identity in drought stress mitigation by arbuscular mycorrhizal fungi in soybean

(2014) Betiana C. Grümberg et al.   BIOLOGY AND FERTILITY OF SOILS

Flavonoids as Important Molecules of Plant Interactions with the Environment

(2014) Justyna Mierziak et al.   MOLECULES

Laccases Direct Lignification in the Discrete Secondary Cell Wall Domains of Protoxylem

(2014) M. Schuetz et al.   PLANT PHYSIOLOGY

Yield increase induced by the fungal root endophyte Piriformospora indica in barley grown at low temperature is nutrient limited

(2014) Brian R. Murphy et al.   SYMBIOSIS

Nutrient transfer in plant–fungal symbioses

(2014) Scott W. Behie et al.   TRENDS IN PLANT SCIENCE

Modulation of artemisinin biosynthesis by elicitors, inhibitor, and precursor in hairy root cultures of Artemisia annua L.

(2014) S. Ahlawat et al.   Journal of Plant Interactions

Root endophytePiriformospora indicaDSM 11827 alters plant morphology, enhances biomass and antioxidant activity of medicinal plantBacopa monniera

(2013) Ram Prasad et al.   JOURNAL OF BASIC MICROBIOLOGY

GASA14 regulates leaf expansion and abiotic stress resistance by modulating reactive oxygen species accumulation

(2013) Shulan Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

Proteomics study reveals the molecular mechanisms underlying water stress tolerance induced by Piriformospora indica in barley

(2013) Mehdi Ghabooli et al.   Journal of Proteomics

A proteomics approach to study the molecular basis of enhanced salt tolerance in barley (Hordeum vulgare L.) conferred by the root mutualistic fungus Piriformospora indica

(2013) Mehdi Alikhani et al.   Molecular BioSystems

The Role ofArabidopsisHeterotrimeric G-Protein Subunits in MLO2 Function and MAMP-Triggered Immunity

(2013) Justine Lorek et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Analyses of wrky18 wrky40 Plants Reveal Critical Roles of SA/EDS1 Signaling and Indole-Glucosinolate Biosynthesis for Golovinomyces orontii Resistance and a Loss-of Resistance Towards Pseudomonas syringae pv. tomato AvrRPS4

(2013) Moritz Schön et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Involvement of the ABCG37 transporter in secretion of scopoletin and derivatives byArabidopsisroots in response to iron deficiency

(2013) Pierre Fourcroy et al.   NEW PHYTOLOGIST

Feruloyl-CoA 6'-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis

(2013) N. B. Schmid et al.   PLANT PHYSIOLOGY

Host-related metabolic cues affect colonization strategies of a root endophyte

(2013) Urs Lahrmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In vitro plant development and root colonization of Coleus forskohlii by Piriformospora indica

(2013) Aparajita Das et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Marked enhancement in the artemisinin content and biomass productivity in Artemisia annua L. shoots co-cultivated with Piriformospora indica

(2013) Gaurav Sharma et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Induction of lignans and phenolic compounds in cell culture of Linum album by culture filtrate of Fusarium graminearum

(2013) Jaleh Tahsili et al.   Journal of Plant Interactions

Structure of RNA-interacting Cyclophilin A-like protein from Piriformospora indica that provides salinity-stress tolerance in plants

(2013) Dipesh Kumar Trivedi et al.   Scientific Reports

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

The Mutualistic Fungus Piriformospora indica Colonizes Arabidopsis Roots by Inducing an Endoplasmic Reticulum Stress-Triggered Caspase-Dependent Cell Death

(2012) X. Qiang et al.   PLANT CELL

The effects of root endophyte and arbuscular mycorrhizal fungi on growth and cadmium accumulation in wheat under cadmium toxicity

(2012) Saleh Shahabivand et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

Ethylene Supports Colonization of Plant Roots by the Mutualistic Fungus Piriformospora indica

(2012) Behnam Khatabi et al.   PLoS One

Identification of soybean purple acid phosphatase genes and their expression responses to phosphorus availability and symbiosis

(2011) Chengchen Li et al.   ANNALS OF BOTANY

A Receptor-like Cytoplasmic Kinase Phosphorylates the Host Target RIN4, Leading to the Activation of a Plant Innate Immune Receptor

(2011) Jun Liu et al.   Cell Host & Microbe

Growth Promotion of Chinese Cabbage andArabidopsisbyPiriformospora indicaIs Not Stimulated by Mycelium-Synthesized Auxin

(2011) Yin-Chen Lee et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Disruption of LACCASE4 and 17 Results in Tissue-Specific Alterations to Lignification of Arabidopsis thaliana Stems

(2011) S. Berthet et al.   PLANT CELL

Broad-Spectrum Suppression of Innate Immunity Is Required for Colonization of Arabidopsis Roots by the Fungus Piriformospora indica

(2011) S. Jacobs et al.   PLANT PHYSIOLOGY

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Effect of Piriformospora indica and Azospirillum strains from saline or non-saline soil on mitigation of the effects of NaCl

(2011) M.J. Zarea et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effect of formulated root endophytic fungus Piriformospora indica and plant growth promoting rhizobacteria fluorescent pseudomonads R62 and R81 on Vigna mungo

(2011) Vinod Kumar et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica

(2011) Alga Zuccaro et al.   PLoS Pathogens

Receptor-like Cytoplasmic Kinases Integrate Signaling from Multiple Plant Immune Receptors and Are Targeted by a Pseudomonas syringae Effector

(2010) Jie Zhang et al.   Cell Host & Microbe

A Phosphate Transporter from the Root Endophytic FungusPiriformospora indicaPlays a Role in Phosphate Transport to the Host Plant

(2010) Vikas Yadav et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Piriformospora indica confers drought tolerance in Chinese cabbage leaves by stimulating antioxidant enzymes, the expression of drought-related genes and the plastid-localized CAS protein

(2010) Chao Sun et al.   JOURNAL OF PLANT PHYSIOLOGY

Molecular Basis of the Core Regulatory Network in ABA Responses: Sensing, Signaling and Transport

(2010) T. Umezawa et al.   PLANT AND CELL PHYSIOLOGY

Root colonization by Piriformospora indica enhances grain yield in barley under diverse nutrient regimes by accelerating plant development

(2010) Beate Achatz et al.   PLANT AND SOIL

Mathematical Modeling of the Central Carbohydrate Metabolism in Arabidopsis Reveals a Substantial Regulatory Influence of Vacuolar Invertase on Whole Plant Carbon Metabolism

(2010) T. Nagele et al.   PLANT PHYSIOLOGY

Evidence That High Activity of Vacuolar Invertase Is Required for Cotton Fiber and Arabidopsis Root Elongation through Osmotic Dependent and Independent Pathways, Respectively

(2010) L. Wang et al.   PLANT PHYSIOLOGY

Arabidopsis PIS1 encodes the ABCG37 transporter of auxinic compounds including the auxin precursor indole-3-butyric acid

(2010) K. Ruzicka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Enhanced production of podophyllotoxins by co-culture of transformed Linum album cells with plant growth-promoting fungi

(2010) Ashish Baldi et al.   PURE AND APPLIED CHEMISTRY

TaSnRK2.4, an SNF1-type serine/threonine protein kinase of wheat (Triticum aestivum L.), confers enhanced multistress tolerance in Arabidopsis

(2009) Xinguo Mao et al.   JOURNAL OF EXPERIMENTAL BOTANY

Antioxidant enzyme activities in maize plants colonized with Piriformospora indica

(2009) M. Kumar et al.   MICROBIOLOGY-SGM

Phenylpropanoid Biosynthesis

(2009) Thomas Vogt   Molecular Plant

Impact of Piriformospora indica on tomato growth and on interaction with fungal and viral pathogens

(2009) Ahmad Fakhro et al.   MYCORRHIZA

The role of jasmonates in mutualistic symbioses between plants and soil-born microorganisms

(2009) Bettina Hause et al.   PHYTOCHEMISTRY

Iron dynamics in the rhizosphere as a case study for analyzing interactions between soils, plants and microbes

(2009) Philippe Lemanceau et al.   PLANT AND SOIL

The Arabidopsis PLEIOTROPIC DRUG RESISTANCE8/ABCG36 ATP Binding Cassette Transporter Modulates Sensitivity to the Auxin Precursor Indole-3-Butyric Acid

(2009) L. C. Strader et al.   PLANT CELL

Manipulation of plant innate immunity and gibberellin as factor of compatibility in the mutualistic association of barley roots withPiriformospora indica

(2009) Patrick Schäfer et al.   PLANT JOURNAL

The Analysis of Arabidopsis Nicotianamine Synthase Mutants Reveals Functions for Nicotianamine in Seed Iron Loading and Iron Deficiency Responses

(2009) M. Klatte et al.   PLANT PHYSIOLOGY

A receptor-like cytoplasmic kinase, BIK1, associates with a flagellin receptor complex to initiate plant innate immunity

(2009) D. Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Co-culture of arbuscular mycorrhiza-like fungi (Piriformospora indica and Sebacina vermifera) with plant cells of Linum album for enhanced production of podophyllotoxins: a first report

(2008) Ashish Baldi et al.   BIOTECHNOLOGY LETTERS

Validation of internal control for gene expression study in soybean by quantitative real-time PCR

(2008) Bo Jian et al.   BMC MOLECULAR BIOLOGY

Arabidopsis iba response5 Suppressors Separate Responses to Various Hormones

(2008) L. C. Strader et al.   GENETICS

Response to flavonoids as a factor influencing competitiveness and symbiotic activity of Rhizobium leguminosarum

(2008) Dominika Maj et al.   MICROBIOLOGICAL RESEARCH

The Root-Colonizing EndophytePirifomospora indicaConfers Drought Tolerance inArabidopsisby Stimulating the Expression of Drought Stress–Related Genes in Leaves

(2008) Irena Sherameti et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The auxin influx carrier LAX3 promotes lateral root emergence

(2008) Kamal Swarup et al.   NATURE CELL BIOLOGY

Salt tolerance of barley induced by the root endophytePiriformospora indicais associated with a strong increase in antioxidants

(2008) Helmut Baltruschat et al.   NEW PHYTOLOGIST

Phosphatase and phytase activities in nodules of common bean genotypes at different levels of phosphorus supply

(2008) Adelson Paulo Araújo et al.   PLANT AND SOIL

Abscisic Acid Coordinates Nod Factor and Cytokinin Signaling during the Regulation of Nodulation in Medicago truncatula

(2008) Y. Ding et al.   PLANT CELL

Systemic and local modulation of plant responses by Piriformospora indica and related Sebacinales species

(2007) Frank Waller et al.   JOURNAL OF PLANT PHYSIOLOGY