Exploration of miRNAs and target genes of cytoplasmic male sterility line in cotton during flower bud development
出版年份 2018 全文链接
标题
Exploration of miRNAs and target genes of cytoplasmic male sterility line in cotton during flower bud development
作者
关键词
miRNA, Target gene, qRT-PCR, Flower bud, Cytoplasmic male sterility (CMS), Upland cotton
出版物
FUNCTIONAL & INTEGRATIVE GENOMICS
Volume 18, Issue 4, Pages 457-476
出版商
Springer Nature
发表日期
2018-04-19
DOI
10.1007/s10142-018-0606-z
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Paternal easiRNAs regulate parental genome dosage in Arabidopsis
- (2018) German Martinez et al. NATURE GENETICS
- Transposon-derived small RNAs triggered by miR845 mediate genome dosage response in Arabidopsis
- (2018) Filipe Borges et al. NATURE GENETICS
- The Role of Non-Coding RNAs in Cytoplasmic Male Sterility in Flowering Plants
- (2017) Helena Štorchová INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Isolation and characterization of the C-class MADS-box gene from the distylous pseudo-cereal Fagopyrum esculentum
- (2017) Lai-Yun Li et al. JOURNAL OF PLANT BIOLOGY
- Genomic analyses in cotton identify signatures of selection and loci associated with fiber quality and yield traits
- (2017) Lei Fang et al. NATURE GENETICS
- Asymmetric subgenome selection and cis-regulatory divergence during cotton domestication
- (2017) Maojun Wang et al. NATURE GENETICS
- Silencing of AtRAP , a target gene of a bacteria-induced small RNA, triggers antibacterial defense responses through activation of LSU2 and down-regulation of GLK1
- (2017) Huan Wang et al. NEW PHYTOLOGIST
- Entire nucleotide sequences of Gossypium raimondii and G. arboreum mitochondrial genomes revealed A-genome species as cytoplasmic donor of the allotetraploid species
- (2017) Z. Chen et al. PLANT BIOLOGY
- A single point mutation in Ms44 results in dominant male sterility and improves nitrogen use efficiency in maize
- (2017) Tim Fox et al. PLANT BIOTECHNOLOGY JOURNAL
- microRNAs involved in auxin signalling modulate male sterility under high-temperature stress in cotton (Gossypium hirsutum )
- (2017) Yuanhao Ding et al. PLANT JOURNAL
- Analysis of transcriptional and epigenetic changes in hybrid vigor of allopolyploid Brassica napus uncovers key roles for small RNAs
- (2017) Yifei Shen et al. PLANT JOURNAL
- Evolution of flower color pattern through selection on regulatory small RNAs
- (2017) Desmond Bradley et al. SCIENCE
- Transcriptomic Analysis Reveals New Insights into High-Temperature-Dependent Glume-Unclosing in an Elite Rice Male Sterile Line
- (2017) Chongyun Fu et al. Frontiers in Plant Science
- MicroRNA and Transcription Factor: Key Players in Plant Regulatory Network
- (2017) Abdul F. A. Samad et al. Frontiers in Plant Science
- A long noncoding RNA involved in rice reproductive development by negatively regulating osa-miR160
- (2017) Meng Wang et al. Science Bulletin
- Transcriptional regulation of male-sterility in 7B-1 male-sterile tomato mutant
- (2017) Vahid Omidvar et al. PLoS One
- Identification of miRNAs and their targets by high-throughput sequencing and degradome analysis in cytoplasmic male-sterile line NJCMS1A and its maintainer NJCMS1B of soybean
- (2016) Xianlong Ding et al. BMC GENOMICS
- High-throughput sequencing and degradome analysis reveal altered expression of miRNAs and their targets in a male-sterile cybrid pummelo (Citrus grandis)
- (2016) Yan-Ni Fang et al. BMC GENOMICS
- Comparative transcriptome profiling of the fertile and sterile flower buds of a dominant genic male sterile line in sesame (Sesamum indicum L.)
- (2016) Hongyan Liu et al. BMC PLANT BIOLOGY
- Functional and evolutionary analyses of the miR156 and miR529 families in land plants
- (2016) Edna Gicela Ortiz Morea et al. BMC PLANT BIOLOGY
- Multi-step formation, evolution and functionalization of new cytoplasmic male sterility genes in the plant mitochondrial genomes
- (2016) Huiwu Tang et al. CELL RESEARCH
- Identification and characterization of microRNAs in the plant parasitic root-knot nematode Meloidogyne incognita using deep sequencing
- (2016) Yanqiong Zhang et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- Synteny and comparative analysis of miRNA retention, conservation, and structure across Brassicaceae reveals lineage- and sub-genome-specific changes
- (2016) Aditi Jain et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- Wheat miRNA ancestors: evident by transcriptome analysis of A, B, and D genome donors
- (2016) Burcu Alptekin et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- Pentatricopeptide repeat proteins in maize
- (2016) Kaifa Wei et al. MOLECULAR BREEDING
- A Mitochondria-Targeted PPR Protein Restores pol Cytoplasmic Male Sterility by Reducing orf224 Transcript Levels in Oilseed Rape
- (2016) Zhi Liu et al. Molecular Plant
- ORA47 (octadecanoid-responsive AP2/ERF-domain transcription factor 47) regulates jasmonic acid and abscisic acid biosynthesis and signaling through binding to a novelcis-element
- (2016) Hsing-Yu Chen et al. NEW PHYTOLOGIST
- ccNET: Database of co-expression networks with functional modules for diploid and polyploidGossypium
- (2016) Qi You et al. NUCLEIC ACIDS RESEARCH
- A Gene Encoding Pentatricopeptide Repeat Protein Partially Restores Fertility in RT98-Type Cytoplasmic Male-Sterile Rice
- (2016) Keisuke Igarashi et al. PLANT AND CELL PHYSIOLOGY
- Interaction between hormonal and mitochondrial signalling during growth, development and in plant defence responses
- (2016) Oliver Berkowitz et al. PLANT CELL AND ENVIRONMENT
- Sequence variation in Brassica AP2 and analysis of interaction of AP2-miR172 regulatory module
- (2016) S. M. Shivaraj et al. PLANT CELL TISSUE AND ORGAN CULTURE
- A common miRNA160-based mechanism regulates ovary patterning, floral organ abscission and lamina outgrowth in tomato
- (2016) Subha Damodharan et al. PLANT JOURNAL
- Integrated analysis of phenome, genome, and transcriptome of hybrid rice uncovered multiple heterosis-related loci for yield increase
- (2016) Dayong Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PMS1T, producing phased small-interfering RNAs, regulates photoperiod-sensitive male sterility in rice
- (2016) Yourong Fan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fine mapping of Restorer-of-fertility in pepper (Capsicum annuum L.) identified a candidate gene encoding a pentatricopeptide repeat (PPR)-containing protein
- (2016) Yeong Deuk Jo et al. THEORETICAL AND APPLIED GENETICS
- Deregulation of the OsmiR160 Target Gene OsARF18 Causes Growth and Developmental Defects with an Alteration of Auxin Signaling in Rice
- (2016) Jian Huang et al. Scientific Reports
- A Factor Linking Floral Organ Identity and Growth Revealed by Characterization of the Tomato Mutant unfinished flower development (ufd)
- (2016) Sandra Poyatos-Pertíñez et al. Frontiers in Plant Science
- Identification of microRNAs and Their Target Genes Explores miRNA-Mediated Regulatory Network of Cytoplasmic Male Sterility Occurrence during Anther Development in Radish (Raphanus sativus L.)
- (2016) Wei Zhang et al. Frontiers in Plant Science
- Expression of a mitochondrial gene orfH79 from CMS-Honglian rice inhibits Escherichia coli growth via deficient oxygen consumption
- (2016) Xia Ding et al. SpringerPlus
- Transcript Analysis and Regulative Events during Flower Development in Olive (Olea europaea L.)
- (2016) Fiammetta Alagna et al. PLoS One
- Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes
- (2015) Mingyong Tang et al. BMC GENOMICS
- Plant miRNAs: biogenesis, organization and origins
- (2015) Hikmet Budak et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- Analysis of gene expression patterns and levels in maize hybrids and their parents
- (2015) H.S. Nie et al. GENETICS AND MOLECULAR RESEARCH
- MicroRNA: a new target for improving plant tolerance to abiotic stress
- (2015) Baohong Zhang JOURNAL OF EXPERIMENTAL BOTANY
- Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution
- (2015) Fuguang Li et al. NATURE BIOTECHNOLOGY
- Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement
- (2015) Tianzhen Zhang et al. NATURE BIOTECHNOLOGY
- microRNA160 dictates stage-specific auxin and cytokinin sensitivities and directs soybean nodule development
- (2015) Narasimha Rao Nizampatnam et al. PLANT JOURNAL
- miRNAs and lncRNAs in reproductive development
- (2015) Zhe-Feng Li et al. PLANT SCIENCE
- MicroRNAs in cotton: an open world needs more exploration
- (2015) Qinglian Wang et al. PLANTA
- Identification of candidate genes associated with fertility restoration of cytoplasmic male-sterility in onion (Allium cepa L.) using a combination of bulked segregant analysis and RNA-seq
- (2015) Sunggil Kim et al. THEORETICAL AND APPLIED GENETICS
- Gossypium barbadense genome sequence provides insight into the evolution of extra-long staple fiber and specialized metabolites
- (2015) Xia Liu et al. Scientific Reports
- The genome sequence of Sea-Island cotton (Gossypium barbadense) provides insights into the allopolyploidization and development of superior spinnable fibres
- (2015) Daojun Yuan et al. Scientific Reports
- Differentiated expression of microRNAs may regulate genotype-dependent traits in cotton
- (2014) Runrun Sun et al. GENE
- Genome sequence of the cultivated cotton Gossypium arboreum
- (2014) Fuguang Li et al. NATURE GENETICS
- Small RNA and degradome profiling reveals a role for miRNAs and their targets in the developing fibers ofGossypium barbadense
- (2014) Nian Liu et al. PLANT JOURNAL
- Sugar and Auxin Signaling Pathways Respond to High-Temperature Stress during Anther Development as Revealed by Transcript Profiling Analysis in Cotton
- (2014) L. Min et al. PLANT PHYSIOLOGY
- Comparative expression profiling of miRNAs between the cytoplasmic male sterile line MeixiangA and its maintainer line MeixiangB during rice anther development
- (2014) Junjie Yan et al. PLANTA
- Classification and Comparison of Small RNAs from Plants
- (2013) Michael J. Axtell Annual Review of Plant Biology
- Male Sterility and Fertility Restoration in Crops
- (2013) Letian Chen et al. Annual Review of Plant Biology
- Comparative expression profiling of miRNA during anther development in genetic male sterile and wild type cotton
- (2013) Mingming Wei et al. BMC PLANT BIOLOGY
- Construction and initial analysis of five Fosmid libraries of mitochondrial genomes of cotton (Gossypium)
- (2013) ShuangShuang Li et al. CHINESE SCIENCE BULLETIN
- Emerging roles of microRNAs in the mediation of drought stress response in plants
- (2013) Yanfei Ding et al. JOURNAL OF EXPERIMENTAL BOTANY
- miRBase: annotating high confidence microRNAs using deep sequencing data
- (2013) Ana Kozomara et al. NUCLEIC ACIDS RESEARCH
- Phased, Secondary, Small Interfering RNAs in Posttranscriptional Regulatory Networks
- (2013) Q. Fei et al. PLANT CELL
- Auxin controls Arabidopsis anther dehiscence by regulating endothecium lignification and jasmonic acid biosynthesis
- (2013) Valentina Cecchetti et al. PLANT JOURNAL
- The Complete Mitochondrial Genome of Gossypium hirsutum and Evolutionary Analysis of Higher Plant Mitochondrial Genomes
- (2013) Guozheng Liu et al. PLoS One
- Discovery of MicroRNAs Associated with the S Type Cytoplasmic Male Sterility in Maize
- (2013) Jiang-hua YU et al. Journal of Integrative Agriculture
- Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
- (2012) Andrew H. Paterson et al. NATURE
- The draft genome of a diploid cotton Gossypium raimondii
- (2012) Kunbo Wang et al. NATURE GENETICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- An Improved CTAB-Ammonium Acetate Method for Total RNA Isolation from Cotton
- (2012) Lu Zhao et al. PHYTOCHEMICAL ANALYSIS
- TamiR159 Directed Wheat TaGAMYB Cleavage and Its Involvement in Anther Development and Heat Response
- (2012) Yu Wang et al. PLoS One
- A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice
- (2012) J. Ding et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Rapid Evolution of Enormous, Multichromosomal Genomes in Flowering Plant Mitochondria with Exceptionally High Mutation Rates
- (2012) Daniel B. Sloan et al. PLOS BIOLOGY
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- A Comparative miRNAome Analysis Reveals Seven Fiber Initiation-Related and 36 Novel miRNAs in Developing Cotton Ovules
- (2011) Zheng-Ming Wang et al. Molecular Plant
- miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
- (2011) Marc R. Friedländer et al. NUCLEIC ACIDS RESEARCH
- Mitochondrially-targeted expression of a cytoplasmic male sterility-associated orf220 gene causes male sterility in Brassica juncea
- (2010) Jinghua Yang et al. BMC PLANT BIOLOGY
- Cytoplasmic male sterility-regulated novel microRNAs from maize
- (2010) Yaou Shen et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- Cleistogamous flowering in barley arises from the suppression of microRNA-guided HvAP2 mRNA cleavage
- (2009) S. K. Nair et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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