Pentatricopeptide repeat proteins in maize

Crucial roles of the pentatricopeptide repeat protein SOAR1 in Arabidopsis response to drought, salt and cold stresses

(2015) Shang-Chuan Jiang et al.   PLANT MOLECULAR BIOLOGY

Comparative Transcriptome Profiling of the Maize Primary, Crown and Seminal Root in Response to Salinity Stress

(2015) Maolin Zhang et al.   PLoS One

Expression Profile of Maize MicroRNAs Corresponding to Their Target Genes Under Drought Stress

(2014) Ying-Ge Wang et al.   BIOCHEMICAL GENETICS

Maize protein phosphatase gene family: identification and molecular characterization

(2014) Kaifa Wei et al.   BMC GENOMICS

Roles of the nuclear-encoded chloroplast SMR domain-containing PPR protein SVR7 in photosynthesis and oxidative stress tolerance in Arabidopsis

(2014) He-Xin Lv et al.   JOURNAL OF PLANT BIOLOGY

Protein kinase structure, expression and regulation in maize drought signaling

(2014) Kaifa Wei et al.   MOLECULAR BREEDING

A Novel Chloroplast-Localized Pentatricopeptide Repeat Protein Involved in Splicing Affects Chloroplast Development and Abiotic Stress Response in Rice

(2014) Junjie Tan et al.   Molecular Plant

The cytidine deaminase signature HxE(x)nCxxC of DYW1 binds zinc and is necessary for RNA editing ofndhD-1

(2014) Clément Boussardon et al.   NEW PHYTOLOGIST

A restorer-of-fertility like pentatricopeptide repeat gene directs ribonucleolytic processing within the coding sequence ofrps3-rpl16andorf240amitochondrial transcripts inArabidopsis thaliana

(2014) Nadège Arnal et al.   PLANT JOURNAL

An artificial PPR scaffold for programmable RNA recognition

(2014) Sandrine Coquille et al.   Nature Communications

Male Sterility and Fertility Restoration in Crops

(2013) Letian Chen et al.   Annual Review of Plant Biology

The Arabidopsis thaliana RNA Editing Factor SLO2, which Affects the Mitochondrial Electron Transport Chain, Participates in Multiple Stress and Hormone Responses

(2013) Qiang Zhu et al.   Molecular Plant

Structural basis for the modular recognition of single-stranded RNA by PPR proteins

(2013) Ping Yin et al.   NATURE

Mutagenesis of Individual Pentatricopeptide Repeat Motifs Affects RNA Binding Activity and Reveals Functional Partitioning of Arabidopsis PROTON GRADIENT REGULATION3

(2013) S. Fujii et al.   PLANT CELL

RNA PROCESSING FACTOR 5 is required for efficient 5′ cleavage at a processing site conserved in RNAs of three different mitochondrial genes inArabidopsis thaliana

(2013) Aron Hauler et al.   PLANT JOURNAL

The E domains of pentatricopeptide repeat proteins from different organelles are not functionally equivalent for RNA editing

(2013) Anne-Laure Chateigner-Boutin et al.   PLANT JOURNAL

Genome-scale evolution and phylodynamics of H5N1 influenza virus in China during 1996–2012

(2013) Kaifa Wei et al.   VETERINARY MICROBIOLOGY

Identification of genes specifically or preferentially expressed in maize silk reveals similarity and diversity in transcript abundance of different dry stigmas

(2012) Xiao Xu et al.   BMC GENOMICS

Molecular Phylogenetic and Expression Analysis of the Complete WRKY Transcription Factor Family in Maize

(2012) K.-F. Wei et al.   DNA RESEARCH

Two Related RNA-editing Proteins Target the Same Sites in Mitochondria ofArabidopsis thaliana

(2012) Daniil Verbitskiy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The pentatricopeptide repeat-SMR protein ATP4 promotes translation of the chloroplastatpB/EmRNA

(2012) Reimo Zoschke et al.   PLANT JOURNAL

RiceMPR25encodes a pentatricopeptide repeat protein and is essential for RNA editing ofnad5transcripts in mitochondria

(2012) Takushi Toda et al.   PLANT JOURNAL

Functional disruption of the pentatricopeptide protein SLG1 affects mitochondrial RNA editing, plant development, and responses to abiotic stresses in Arabidopsis

(2012) Hui Yuan et al.   PLANT JOURNAL

Effects of Drought on Gene Expression in Maize Reproductive and Leaf Meristem Tissue Revealed by RNA-Seq

(2012) A. Kakumanu et al.   PLANT PHYSIOLOGY

RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

(2012) S. Bentolila et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The DYW-class PPR protein MEF7 is required for RNA editing at four sites in mitochondria ofArabidopsis thaliana

(2012) Anja Zehrmann et al.   RNA Biology

The Pentatricopeptide Repeat Protein OTP87 Is Essential for RNA Editing ofnad7andatp1Transcripts inArabidopsisMitochondria

(2011) Kamel Hammani et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

SyMAP v3.4: a turnkey synteny system with application to plant genomes

(2011) Carol Soderlund et al.   NUCLEIC ACIDS RESEARCH

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

AnArabidopsisDual-Localized Pentatricopeptide Repeat Protein Interacts with Nuclear Proteins Involved in Gene Expression Regulation

(2011) Kamel Hammani et al.   PLANT CELL

RNA PROCESSING FACTOR3 Is Crucial for the Accumulation of Mature ccmC Transcripts in Mitochondria of Arabidopsis Accession Columbia

(2011) C. Jonietz et al.   PLANT PHYSIOLOGY

The maize ALDH protein superfamily: linking structural features to functional specificities

(2011) Jose C Jimenez-Lopez et al.   BMC STRUCTURAL BIOLOGY

Target-align: a tool for plant microRNA target identification: Fig. 1.

(2010) Fuliang Xie et al.   BIOINFORMATICS

The involvement of a PPR protein of the P subfamily in partial RNA editing of an Arabidopsis mitochondrial transcript

(2010) Yoko Doniwa et al.   GENE

Reverse Genetic Screening Identifies Five E-class PPR Proteins Involved in RNA Editing in Mitochondria ofArabidopsis thaliana

(2010) Mizuki Takenaka et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identification of a Pentatricopeptide Repeat Protein Implicated in Splicing of Intron 1 of Mitochondrialnad7Transcripts

(2010) Anna Koprivova et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

RNA PROCESSING FACTOR2 Is Required for 5' End Processing of nad9 and cox3 mRNAs in Mitochondria of Arabidopsis thaliana

(2010) C. Jonietz et al.   PLANT CELL

A RESTORER OF FERTILITY-like PPR gene is required for 5′-end processing of the nad4 mRNA in mitochondria of Arabidopsis thaliana

(2010) Angela Hölzle et al.   PLANT JOURNAL

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

A DYW Domain-Containing Pentatricopeptide Repeat Protein Is Required for RNA Editing at Multiple Sites in Mitochondria of Arabidopsis thaliana

(2009) A. Zehrmann et al.   PLANT CELL

The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts

(2009) Kenji Okuda et al.   PLANT JOURNAL

AtECB2, a pentatricopeptide repeat protein, is required for chloroplast transcriptaccDRNA editing and early chloroplast biogenesis inArabidopsis thaliana

(2009) Qing-Bo Yu et al.   PLANT JOURNAL

MEF9, an E-Subclass Pentatricopeptide Repeat Protein, Is Required for an RNA Editing Event in the nad7 Transcript in Mitochondria of Arabidopsis

(2009) M. Takenaka   PLANT PHYSIOLOGY

Molecular Evolution of the CPP-like Gene Family in Plants: Insights from Comparative Genomics of Arabidopsis and Rice

(2008) Zefeng Yang et al.   JOURNAL OF MOLECULAR EVOLUTION

CLB19, a pentatricopeptide repeat protein required for editing ofrpoAandclpPchloroplast transcripts

(2008) Anne-Laure Chateigner-Boutin et al.   PLANT JOURNAL

Gene Regulation by Transcription Factors and MicroRNAs

(2008) O. Hobert   SCIENCE

PPR336 is Associated with Polysomes in Plant Mitochondria

(2007) Magalie Uyttewaal et al.   JOURNAL OF MOLECULAR BIOLOGY