标题
UniAligner: a parameter-free framework for fast sequence alignment
作者
关键词
-
出版物
NATURE METHODS
Volume 20, Issue 9, Pages 1346-1354
出版商
Springer Science and Business Media LLC
发表日期
2023-08-15
DOI
10.1038/s41592-023-01970-4
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A draft human pangenome reference
- (2023) Wen-Wei Liao et al. NATURE
- Telomere-to-telomere assembly of diploid chromosomes with Verkko
- (2023) Mikko Rautiainen et al. NATURE BIOTECHNOLOGY
- Efficient mapping of accurate long reads in minimizer space with mapquik
- (2023) Bariş Ekim et al. GENOME RESEARCH
- StainedGlass: interactive visualization of massive tandem repeat structures with identity heatmaps
- (2022) Mitchell R Vollger et al. BIOINFORMATICS
- Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
- (2022) Derek M. Bickhart et al. NATURE BIOTECHNOLOGY
- Gene prediction in the immunoglobulin loci
- (2022) Vikram Sirupurapu et al. GENOME RESEARCH
- Automated annotation of human centromeres with HORmon
- (2022) Olga Kunyavskaya et al. GENOME RESEARCH
- The Human Pangenome Project: a global resource to map genomic diversity
- (2022) Ting Wang et al. NATURE
- Multiplex de Bruijn graphs enable genome assembly from long, high-fidelity reads
- (2022) Anton Bankevich et al. NATURE BIOTECHNOLOGY
- Complete genomic and epigenetic maps of human centromeres
- (2022) Nicolas Altemose et al. SCIENCE
- From telomere to telomere: The transcriptional and epigenetic state of human repeat elements
- (2022) Savannah J. Hoyt et al. SCIENCE
- The complete sequence of a human genome
- (2022) Sergey Nurk et al. SCIENCE
- Segmental duplications and their variation in a complete human genome
- (2022) Mitchell R. Vollger et al. SCIENCE
- Detecting tandem repeat variants in coding regions using code-adVNTR
- (2022) Jonghun Park et al. iScience
- Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm
- (2021) Haoyu Cheng et al. NATURE METHODS
- The structure, function and evolution of a complete human chromosome 8
- (2021) Glennis A. Logsdon et al. NATURE
- Towards complete and error-free genome assemblies of all vertebrate species
- (2021) Arang Rhie et al. NATURE
- Variable number tandem repeats mediate the expression of proximal genes
- (2021) Mehrdad Bakhtiari et al. Nature Communications
- CentromereArchitect: inference and analysis of the architecture of centromeres
- (2021) Tatiana Dvorkina et al. BIOINFORMATICS
- Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer
- (2021) Barış Ekim et al. Cell Systems
- Variation and Evolution of Human Centromeres: A Field Guide and Perspective
- (2021) Karen H. Miga et al. Annual Review of Genetics
- New strategies to improve minimap2 alignment accuracy
- (2021) Heng Li BIOINFORMATICS
- TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats
- (2020) Alla Mikheenko et al. BIOINFORMATICS
- Telomere-to-telomere assembly of a complete human X chromosome
- (2020) Karen H. Miga et al. NATURE
- Automated assembly of centromeres from ultra-long error-prone reads
- (2020) Andrey V. Bzikadze et al. NATURE BIOTECHNOLOGY
- HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads
- (2020) Sergey Nurk et al. GENOME RESEARCH
- V(DD)J recombination is an important and evolutionarily conserved mechanism for generating antibodies with unusually long CDR3s
- (2020) Yana Safonova et al. GENOME RESEARCH
- A Novel Framework for Characterizing Genomic Haplotype Diversity in the Human Immunoglobulin Heavy Chain Locus
- (2020) Oscar L. Rodriguez et al. Frontiers in Immunology
- Profiling the genome-wide landscape of tandem repeat expansions
- (2019) Nima Mousavi et al. NUCLEIC ACIDS RESEARCH
- Multi-platform discovery of haplotype-resolved structural variation in human genomes
- (2019) Mark J. P. Chaisson et al. Nature Communications
- Minimap2: pairwise alignment for nucleotide sequences
- (2018) Heng Li BIOINFORMATICS
- A review of somatic single nucleotide variant calling algorithms for next-generation sequencing data
- (2018) Chang Xu Computational and Structural Biotechnology Journal
- Targeted genotyping of variable number tandem repeats with adVNTR
- (2018) Mehrdad Bakhtiari et al. GENOME RESEARCH
- Repetitive Fragile Sites: Centromere Satellite DNA As a Source of Genome Instability in Human Diseases
- (2018) Elizabeth M. Black et al. Genes
- Centromere and Pericentromere Transcription: Roles and Regulation … in Sickness and in Health
- (2018) Ksenia Smurova et al. Frontiers in Genetics
- Integrity of the human centromere DNA repeats is protected by CENP-A, CENP-C, and CENP-T
- (2017) Simona Giunta et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution
- (2013) Daniël P Melters et al. GENOME BIOLOGY
- Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory
- (2012) Mark J Chaisson et al. BMC BIOINFORMATICS
- The immunoglobulin heavy chain locus: genetic variation, missing data and implications for human disease
- (2012) C T Watson et al. GENES AND IMMUNITY
- Human aneuploidy: mechanisms and new insights into an age-old problem
- (2012) So I. Nagaoka et al. NATURE REVIEWS GENETICS
- Rapid evolution of mouse Y centromere repeat DNA belies recent sequence stability
- (2009) M. D. Pertile et al. GENOME RESEARCH
- The Evolutionary Origin of Man Can Be Traced in the Layers of Defunct Ancestral Alpha Satellites Flanking the Active Centromeres of Human Chromosomes
- (2009) Valery A. Shepelev et al. PLoS Genetics
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More