CRISPR-Cas Genome Editing Technique for Fish Disease Management: Current Study and Future Perspective

Development of an RNA anti-parasite based on CRISPR-Cas9 against Chilodonella piscicola

(2022) Yige Li et al.   AQUACULTURE

Molecular Characterization of Paralichthys olivaceus MAF1 and Its Potential Role as an Anti-Viral Hemorrhagic Septicaemia Virus Factor in Hirame Natural Embryo Cells

(2021) Julan Kim et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes

(2021) Satoshi Ansai et al.   Nature Communications

Efficient RNA Virus Targeting via CRISPR/CasRx in Fish

(2021) Qing Wang et al.   JOURNAL OF VIROLOGY

Sustainable use of CRISPR/Cas in fish aquaculture: the biosafety perspective

(2021) Arinze S. Okoli et al.   TRANSGENIC RESEARCH

Genome editing on finfish: Current status and implications for sustainability

(2021) Torill Bakkelund Blix et al.   Reviews in Aquaculture

Pathogen detection strategy based on CRISPR

(2021) Yachen Tian et al.   MICROCHEMICAL JOURNAL

Betanodavirus and VER Disease: A 30-year Research Review

(2020) Isabel Bandín et al.   Pathogens

Harnessing genomics to fast-track genetic improvement in aquaculture

(2020) Ross D. Houston et al.   NATURE REVIEWS GENETICS

Characterization of Novel Aptamers Specifically Directed to Red-Spotted Grouper Nervous Necrosis Virus (RGNNV)-Infected Cells for Mediating Targeted siRNA Delivery

(2020) Lingli Zhou et al.   Frontiers in Microbiology

Efficient CRISPR/Cas9 genome editing in a salmonid fish cell line using a lentivirus delivery system

(2020) Remi L. Gratacap et al.   BMC BIOTECHNOLOGY

Barcode sequence could be a good target for developing a species‐specific anti‐parasite agent based on CRISPR‐Cas9

(2020) Yinlai Pan et al.   FASEB JOURNAL

Physiological impact and comparison of mutant screening methods in piwil2 KO founder Nile tilapia produced by CRISPR/Cas9 system

(2020) Ye Hwa Jin et al.   Scientific Reports

CRISPR-Cas system: a potential alternative tool to cope antibiotic resistance

(2020) Bilal Aslam et al.   Antimicrobial Resistance and Infection Control

CRISPR-Cas9 DNA Base-Editing and Prime-Editing

(2020) Ariel Kantor et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

CRISPR/Cas9-mediated knock-in of alligator cathelicidin gene in a non-coding region of channel catfish genome

(2020) Rhoda Mae C. Simora et al.   Scientific Reports

beditor: A Computational Workflow for Designing Libraries of Guide RNAs for CRISPR-Mediated Base Editing

(2019) Rohan Dandage et al.   GENETICS

Production of a mutant of large-scale loach Paramisgurnus dabryanus with skin pigmentation loss by genome editing with CRISPR/Cas9 system

(2019) Xiuwen Xu et al.   TRANSGENIC RESEARCH

Application of genome editing in aquatic farm animals: Atlantic salmon

(2019) Anna Wargelius   TRANSGENIC RESEARCH

Potential of Genome Editing to Improve Aquaculture Breeding and Production

(2019) Remi L. Gratacap et al.   TRENDS IN GENETICS

CRISPR/Cas9-mediated ablation of elovl2 in Atlantic salmon (Salmo salar L.) inhibits elongation of polyunsaturated fatty acids and induces Srebp-1 and target genes

(2019) Alex K. Datsomor et al.   Scientific Reports

Bacteriophage Adherence to Mucus Mediates Preventive Protection against Pathogenic Bacteria

(2019) Gabriel M. F. Almeida et al.   mBio

CRISPR/Cas9-mediated editing of Δ5 and Δ6 desaturases impairs Δ8-desaturation and docosahexaenoic acid synthesis in Atlantic salmon (Salmo salar L.)

(2019) Alex K. Datsomor et al.   Scientific Reports

Programmable Inhibition and Detection of RNA Viruses Using Cas13

(2019) Catherine A. Freije et al.   MOLECULAR CELL

Transcriptome Engineering with RNA-Targeting Type VI-D CRISPR Effectors

(2018) Silvana Konermann et al.   CELL

Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance

(2018) D.G. Joakim Larsson et al.   ENVIRONMENT INTERNATIONAL

Exploration of the Germline Genome of the Ciliate Chilodonella uncinata through Single-Cell Omics (Transcriptomics and Genomics)

(2018) Xyrus X. Maurer-Alcalá et al.   mBio

Microinjection of CRISPR/Cas9 Protein into Channel Catfish, Ictalurus punctatus, Embryos for Gene Editing

(2018) Ahmed Elaswad et al.   Jove-Journal of Visualized Experiments

Parasitic versus nutritional regulation of natural fish populations

(2018) Amélie Frantz et al.   Ecology and Evolution

Robust activation of microhomology-mediated end joining for precision gene editing applications

(2018) Hirotaka Ata et al.   PLoS Genetics

ASIP disruption via CRISPR/Cas9 system induces black patches dispersion in Oujiang color common carp

(2018) Honglin Chen et al.   AQUACULTURE

Web-based design and analysis tools for CRISPR base editing

(2018) Gue-Ho Hwang et al.   BMC BIOINFORMATICS

Global Aquaculture Productivity, Environmental Sustainability, and Climate Change Adaptability

(2018) Nesar Ahmed et al.   ENVIRONMENTAL MANAGEMENT

ICTV Virus Taxonomy Profile: Nodaviridae

(2018) A. S. Sahul Hameed et al.   JOURNAL OF GENERAL VIROLOGY

Predictable and precise template-free CRISPR editing of pathogenic variants

(2018) Max W. Shen et al.   NATURE

Predicting the mutations generated by repair of Cas9-induced double-strand breaks

(2018) Felicity Allen et al.   NATURE BIOTECHNOLOGY

Editing the genome of Aphanomyces invadans using CRISPR/Cas9

(2018) Muhammad Majeed et al.   Parasites & Vectors

Effects of CRISPR/Cas9 dosage on TICAM1 and RBL gene mutation rate, embryonic development, hatchability and fry survival in channel catfish

(2018) Ahmed Elaswad et al.   Scientific Reports

Minimal PAM specificity of a highly similar SpCas9 ortholog

(2018) Pranam Chatterjee et al.   Science Advances

CRISPR-Mediated Base Editing Enables Efficient Disruption of Eukaryotic Genes through Induction of STOP Codons

(2017) Pierre Billon et al.   MOLECULAR CELL

RNA targeting with CRISPR–Cas13

(2017) Omar O. Abudayyeh et al.   NATURE

Recent developments in genome editing and applications in plant breeding

(2017) Christian Jung et al.   PLANT BREEDING

RNA editing with CRISPR-Cas13

(2017) David B. T. Cox et al.   SCIENCE

Stumbling across the Same Phage: Comparative Genomics of Widespread Temperate Phages Infecting the Fish Pathogen Vibrio anguillarum

(2017) Panos Kalatzis et al.   Viruses-Basel

Disease reduction in aquaculture with genetic and genomic technology: current and future approaches

(2017) Ahmed Elaswad et al.   Reviews in Aquaculture

Cas-analyzer: an online tool for assessing genome editing results using NGS data

(2016) Jeongbin Park et al.   BIOINFORMATICS

Genetic and life-history traits associated with the distribution of prophages in bacteria

(2016) Marie Touchon et al.   ISME Journal

C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector

(2016) Omar O. Abudayyeh et al.   SCIENCE

Captive maturation studies in Penaeus monodon by GIH silencing using constitutively expressed long hairpin RNA

(2015) Rekha Das et al.   AQUACULTURE

Cas-Designer: a web-based tool for choice of CRISPR-Cas9 target sites

(2015) Jeongbin Park et al.   BIOINFORMATICS

CRISPR-ERA: a comprehensive design tool for CRISPR-mediated gene editing, repression and activation: Fig. 1.

(2015) Honglei Liu et al.   BIOINFORMATICS

The CRISPR/Cas9 system for plant genome editing and beyond

(2015) Luisa Bortesi et al.   BIOTECHNOLOGY ADVANCES

Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems

(2015) Sergey Shmakov et al.   MOLECULAR CELL

Engineered CRISPR-Cas9 nucleases with altered PAM specificities

(2015) Benjamin P. Kleinstiver et al.   NATURE

CRISPRz: a database of zebrafish validated sgRNAs

(2015) Gaurav K. Varshney et al.   NUCLEIC ACIDS RESEARCH

Off-target Effects in CRISPR/Cas9-mediated Genome Engineering

(2015) Xiao-Hui Zhang et al.   Molecular Therapy-Nucleic Acids

Genome editing assessment using CRISPR Genome Analyzer (CRISPR-GA)

(2014) M. Guell et al.   BIOINFORMATICS

SWR1 and INO80 Chromatin Remodelers Contribute to DNA Double-Strand Break Perinuclear Anchorage Site Choice

(2014) Chihiro Horigome et al.   MOLECULAR CELL

Whole-genome duplication in teleost fishes and its evolutionary consequences

(2014) Stella M. K. Glasauer et al.   MOLECULAR GENETICS AND GENOMICS

The new CRISPR–Cas system: RNA-guided genome engineering to efficiently produce any desired genetic alteration in animals

(2014) Davide Seruggia et al.   TRANSGENIC RESEARCH

Antimicrobial use in aquaculture re-examined: its relevance to antimicrobial resistance and to animal and human health

(2013) Felipe C. Cabello et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic structure of bacteriophage 6H and its distribution as prophage inFlavobacterium psychrophilumstrains

(2013) Daniel Castillo et al.   FEMS MICROBIOLOGY LETTERS

DNA targeting specificity of RNA-guided Cas9 nucleases

(2013) Patrick D Hsu et al.   NATURE BIOTECHNOLOGY

Efficient genome editing in zebrafish using a CRISPR-Cas system

(2013) Woong Y Hwang et al.   NATURE BIOTECHNOLOGY

Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system

(2013) Khaoula Belhaj et al.   Plant Methods

Tools from viruses: Bacteriophage successes and beyond

(2012) Marine Henry et al.   VIROLOGY

Human intervention in freshwater ecosystems drives disease emergence

(2011) EDMUND J. PEELER et al.   FRESHWATER BIOLOGY

Evolution and classification of the CRISPR–Cas systems

(2011) Kira S. Makarova et al.   NATURE REVIEWS MICROBIOLOGY

Induction of Ovarian Maturation and Spawning in Penaeus monodon Broodstock by Double-Stranded RNA

(2010) Supattra Treerattrakool et al.   MARINE BIOTECHNOLOGY

Crustacean molt-inhibiting hormone: Structure, function, and cellular mode of action

(2008) Teruaki Nakatsuji et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY