Admixture and breed traceability in European indigenous pig breeds and wild boar using genome-wide SNP data

Runs of homozygosity provide a genome landscape picture of inbreeding and genetic history of European autochthonous and commercial pig breeds

(2021) G. Schiavo et al.   ANIMAL GENETICS

Genome-Wide Analysis Reveals Human-Mediated Introgression from Western Pigs to Indigenous Chinese Breeds

(2020) Jue Wang et al.   Genes

Genetic Diversities and Differentially Selected Regions Between Shandong Indigenous Pig Breeds and Western Pig Breeds

(2020) Ming Qin et al.   Frontiers in Genetics

Consumers’ Concerns and Perceptions of Farm Animal Welfare

(2020) Marta E. Alonso et al.   Animals

Conservation Genomic Analysis of the Croatian Indigenous Black Slavonian and Turopolje Pig Breeds

(2020) Boris Lukić et al.   Frontiers in Genetics

Genome Wide Assessment of Genetic Variation and Population Distinctiveness of the Pig Family in South Africa

(2020) Nompilo Lucia Hlongwane et al.   Frontiers in Genetics

Runs of homozygosity islands in Italian cosmopolitan and autochthonous pig breeds identify selection signatures in the porcine genome

(2020) Giuseppina Schiavo et al.   Livestock Science

Development of a 64 SNV panel for breed authentication in Iberian pigs and their derived meat products

(2020) M. Muñoz et al.   MEAT SCIENCE

Tracing selection signatures in the pig genome gives evidence for selective pressures on a unique curly hair phenotype in Mangalitza

(2020) Kathrin Schachler et al.   Scientific Reports

Understanding consumers' perceptions towards Iberian pig production and animal welfare

(2020) Javier García-Gudiño et al.   MEAT SCIENCE

Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe

(2019) Laurent A. F. Frantz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic diversity, breed composition and admixture of Kenyan domestic pigs

(2018) Fidalis Denis Mujibi et al.   PLoS One

Discriminant analysis of principal components and pedigree assessment of genetic diversity and population structure in a tetraploid potato panel using SNPs

(2018) Sofía. I. Deperi et al.   PLoS One

A genome-wide detection of selection signatures in conserved and commercial pig breeds maintained in Poland

(2018) Artur Gurgul et al.   BMC GENETICS

Diversity across major and candidate genes in European local pig breeds

(2018) María Muñoz et al.   PLoS One

Niche pork: Comparing pig performance and understanding producer benefits, barriers and labeling interest

(2017) Jamie A. Picardy et al.   RENEWABLE AGRICULTURE AND FOOD SYSTEMS

The Munich MIDY Pig Biobank – A unique resource for studying organ crosstalk in diabetes

(2017) Andreas Blutke et al.   Molecular Metabolism

Complex heatmaps reveal patterns and correlations in multidimensional genomic data

(2016) Zuguang Gu et al.   BIOINFORMATICS

An inside look at the first pig biobank

(2015) Alison Abbott   NATURE

Selection of discriminant SNP markers for breed and geographic assignment of Italian sheep

(2015) C. Dimauro et al.   SMALL RUMINANT RESEARCH

Use of the canonical discriminant analysis to select SNP markers for bovine breed assignment and traceability purposes

(2013) C. Dimauro et al.   ANIMAL GENETICS

Pig Domestication and Human-Mediated Dispersal in Western Eurasia Revealed through Ancient DNA and Geometric Morphometrics

(2012) Claudio Ottoni et al.   MOLECULAR BIOLOGY AND EVOLUTION

adegenet 1.3-1: new tools for the analysis of genome-wide SNP data

(2011) Thibaut Jombart et al.   BIOINFORMATICS

Evaluation of approaches for identifying population informative markers from high density SNP Chips

(2011) Samantha Wilkinson et al.   BMC GENETICS

Comparison of measures of marker informativeness for ancestry and admixture mapping

(2011) Lili Ding et al.   BMC GENOMICS

Tracing Cattle Breeds with Principal Components Analysis Ancestry Informative SNPs

(2011) Jamey Lewis et al.   PLoS One

Genetic variability, structure and assignment of Spanish and French pig populations based on a large sampling

(2010) S. Boitard et al.   ANIMAL GENETICS

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

European pig genetic diversity: a minireview

(2009) L. Ollivier   Animal

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology

(2009) Antonio M. Ramos et al.   PLoS One

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS