标题
Genomic Analysis of Prophages from Klebsiella pneumoniae Clinical Isolates
作者
关键词
-
出版物
Microorganisms
Volume 9, Issue 11, Pages 2252
出版商
MDPI AG
发表日期
2021-10-29
DOI
10.3390/microorganisms9112252
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Genome-Wide Identification and Analysis of Chromosomally Integrated Putative Prophages Associated with Clinical Klebsiella pneumoniae Strains
- (2021) Pallavi Baliga et al. CURRENT MICROBIOLOGY
- Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
- (2021) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- The DnaK/DnaJ Chaperone System Enables RNA Polymerase-DksA Complex Formation in Salmonella Experiencing Oxidative Stress
- (2021) Ju-Sim Kim et al. mBio
- Genomics and Virulence of Klebsiella pneumoniae Kpnu95 ST1412 Harboring a Novel Incf Plasmid Encoding Blactx-M-15 and Qnrs1 Causing Community Urinary Tract Infection
- (2021) Ayala Gancz et al. Microorganisms
- In vitro and in vivo efficacy of combinations of colistin and different endolysins against clinical strains of multi-drug resistant pathogens
- (2020) Lucia Blasco et al. Scientific Reports
- Whole-genome sequencing resolves a polyclonal outbreak by extended-spectrum beta-lactam and carbapenem-resistant Klebsiella pneumoniae in a Portuguese tertiary-care hospital
- (2020) João Perdigão et al. Microbial Genomics
- Genomic analysis of 40 prophages located in the genomes of 16 carbapenemase-producing clinical strains of Klebsiella pneumoniae
- (2020) Ines Bleriot et al. Microbial Genomics
- Heat Shock Protein DnaJ in Pseudomonas aeruginosa Affects Biofilm Formation via Pyocyanin Production
- (2020) Bo Zeng et al. Microorganisms
- Modular prophage interactions driven by capsule serotype select for capsule loss under phage predation
- (2020) Jorge A. M. de Sousa et al. ISME Journal
- Bacteriophages and Lysins as Possible Alternatives to Treat Antibiotic-Resistant Urinary Tract Infections
- (2020) Trinidad de Miguel et al. Antibiotics-Basel
- Epigenomics, genomics, resistome, mobilome, virulome and evolutionary phylogenomics of carbapenem-resistant Klebsiella pneumoniae clinical strains
- (2020) Katlego Kopotsa et al. Microbial Genomics
- Prophage Hunter: an integrative hunting tool for active prophages
- (2019) Wenchen Song et al. NUCLEIC ACIDS RESEARCH
- Prophages contribute to genome plasticity of Klebsiella pneumoniae and may involve the chromosomal integration of ARGs in CG258
- (2019) Juntao Shen et al. GENOMICS
- Analysis of genetic recombination and the pan-genome of a highly recombinogenic bacteriophage species
- (2019) Koji Yahara et al. Microbial Genomics
- The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
- (2019) James J Davis et al. NUCLEIC ACIDS RESEARCH
- Evolutionary Diversity of Prophage DNA in Klebsiella pneumoniae Chromosomes
- (2019) Fengling Wang et al. Frontiers in Microbiology
- Applications of bacteriophages versus phage enzymes to combat and cure bacterial infections: an ambitious and also a realistic application?
- (2018) Barbara Maciejewska et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Relating Phage Genomes to Helicobacter pylori Population Structure: General Steps Using Whole-Genome Sequencing Data
- (2018) Filipa Vale et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- SWISS-MODEL: homology modelling of protein structures and complexes
- (2018) Andrew Waterhouse et al. NUCLEIC ACIDS RESEARCH
- Genomic analysis of Acinetobacter baumannii prophages reveals remarkable diversity and suggests profound impact on bacterial virulence and fitness
- (2018) Ana Rita Costa et al. Scientific Reports
- DksA and ppGpp Regulate the σ S Stress Response by Activating Promoters for the Small RNA DsrA and the Anti-Adapter Protein IraP
- (2017) Mary E. Girard et al. JOURNAL OF BACTERIOLOGY
- Occurrence of carbapenemase-producing Klebsiella pneumoniae and Escherichia coli in the European survey of carbapenemase-producing Enterobacteriaceae (EuSCAPE): a prospective, multinational study
- (2017) Hajo Grundmann et al. LANCET INFECTIOUS DISEASES
- DnaJ (hsp40) of Streptococcus pneumoniae is involved in bacterial virulence and elicits a strong natural immune reaction via PI3K/JNK
- (2017) Jin Cui et al. MOLECULAR IMMUNOLOGY
- Protein Acetylation and Its Role in Bacterial Virulence
- (2017) Jie Ren et al. TRENDS IN MICROBIOLOGY
- Klebsiella phages representing a novel clade of viruses with an unknown DNA modification and biotechnologically interesting enzymes
- (2016) Barbara Maciejewska et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Alternatives to overcoming bacterial resistances: State-of-the-art
- (2016) Alessandra C. Rios et al. MICROBIOLOGICAL RESEARCH
- PHASTER: a better, faster version of the PHAST phage search tool
- (2016) David Arndt et al. NUCLEIC ACIDS RESEARCH
- Klebsiella pneumoniae Population Genomics and Antimicrobial-Resistant Clones
- (2016) Kelly L. Wyres et al. TRENDS IN MICROBIOLOGY
- Comparative genomic analysis of Klebsiella pneumoniae subsp. pneumoniae KP617 and PittNDM01, NUHL24835, and ATCC BAA-2146 reveals unique evolutionary history of this strain
- (2016) Taesoo Kwon et al. Gut Pathogens
- Roary: rapid large-scale prokaryote pan genome analysis
- (2015) Andrew J. Page et al. BIOINFORMATICS
- The Phyre2 web portal for protein modeling, prediction and analysis
- (2015) Lawrence A Kelley et al. Nature Protocols
- A new perspective on lysogeny: prophages as active regulatory switches of bacteria
- (2015) Ron Feiner et al. NATURE REVIEWS MICROBIOLOGY
- RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes
- (2015) Thomas Brettin et al. Scientific Reports
- Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments
- (2014) Divine Shyntum et al. BMC GENOMICS
- Automated classification of tailed bacteriophages according to their neck organization
- (2014) Anne Lopes et al. BMC GENOMICS
- Bacterial Serine/Threonine Protein Kinases in Host-Pathogen Interactions
- (2014) Marc J. Canova et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Pervasive domestication of defective prophages by bacteria
- (2014) L.-M. Bobay et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258Klebsiella pneumoniae
- (2014) Frank R. DeLeo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Clinical relevance of the ESKAPE pathogens
- (2013) Jack N Pendleton et al. Expert Review of Anti-Infective Therapy
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- BLAST: a more efficient report with usability improvements
- (2013) Grzegorz M. Boratyn et al. NUCLEIC ACIDS RESEARCH
- The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
- (2013) Ross Overbeek et al. NUCLEIC ACIDS RESEARCH
- Importance of prophages to evolution and virulence of bacterial pathogens
- (2013) Louis-Charles Fortier et al. Virulence
- Hypervirulent (hypermucoviscous)Klebsiella pneumoniae
- (2013) Alyssa S. Shon et al. Virulence
- Characterization of five novel endolysins from Gram-negative infecting bacteriophages
- (2012) Maarten Walmagh et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- PHACTS, a computational approach to classifying the lifestyle of phages
- (2012) Katelyn McNair et al. BIOINFORMATICS
- Bacteriophage endolysins as novel antimicrobials
- (2012) Mathias Schmelcher et al. Future Microbiology
- Lipoproteins of Bacterial Pathogens
- (2010) A. Kovacs-Simon et al. INFECTION AND IMMUNITY
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Cryptic prophages help bacteria cope with adverse environments
- (2010) Xiaoxue Wang et al. Nature Communications
- The Extinction Dynamics of Bacterial Pseudogenes
- (2010) Chih-Horng Kuo et al. PLoS Genetics
- Regulation of a muralytic enzyme by dynamic membrane topology
- (2009) Qingan Sun et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- TraR, a Homolog of a RNAP Secondary Channel Interactor, Modulates Transcription
- (2009) Matthew D. Blankschien et al. PLoS Genetics
- The RAST Server: Rapid Annotations using Subsystems Technology
- (2008) Ramy K Aziz et al. BMC GENOMICS
- Bacteriophage lysins as effective antibacterials
- (2008) Vincent A Fischetti CURRENT OPINION IN MICROBIOLOGY
- Identification and Functional Characterization of Gene Components of Type VI Secretion System in Bacterial Genomes
- (2008) Sakshi Shrivastava et al. PLoS One
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started