Genomic analysis of 40 prophages located in the genomes of 16 carbapenemase-producing clinical strains of Klebsiella pneumoniae

Phage diversity, genomics and phylogeny

(2020) Moïra B. Dion et al.   NATURE REVIEWS MICROBIOLOGY

Diverse Mechanisms of CRISPR-Cas9 Inhibition by Type IIC Anti-CRISPR Proteins

(2019) Yalan Zhu et al.   MOLECULAR CELL

Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus

(2019) Rebekah M. Dedrick et al.   NATURE MEDICINE

Production and characterization of novel ssRNA bacteriophage virus-like particles from metagenomic sequencing data

(2019) Ilva Liekniņa et al.   JOURNAL OF NANOBIOTECHNOLOGY

The Global Ascendency of OXA-48-Type Carbapenemases

(2019) Johann D. D. Pitout et al.   CLINICAL MICROBIOLOGY REVIEWS

Combined Use of the Ab105-2φΔCI Lytic Mutant Phage and Different Antibiotics in Clinical Isolates of Multi-Resistant Acinetobacter baumannii

(2019) Lucia Blasco et al.   Microorganisms

Antimicrobial-Resistant Klebsiella pneumoniae Carriage and Infection in Specialized Geriatric Care Wards Linked to Acquisition in the Referring Hospital

(2018) Claire L Gorrie et al.   CLINICAL INFECTIOUS DISEASES

Type II toxin/antitoxin system ParESO /CopASO stabilizes prophage CP4So in Shewanella oneidensis

(2018) Jianyun Yao et al.   ENVIRONMENTAL MICROBIOLOGY

A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core

(2018) Lukas Zimmermann et al.   JOURNAL OF MOLECULAR BIOLOGY

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology

(2018) Alexander Harms et al.   MOLECULAR CELL

Burkholderia cenocepacia Prophages—Prevalence, Chromosome Location and Major Genes Involved

(2018) Bartosz Roszniowski et al.   Viruses-Basel

Evolution of the Quorum network and the mobilome (plasmids and bacteriophages) in clinical strains of Acinetobacter baumannii during a decade

(2018) M. López et al.   Scientific Reports

Characterization and Genomic Study of Phage vB_EcoS-B2 Infecting Multidrug-Resistant Escherichia coli

(2018) Yue Xu et al.   Frontiers in Microbiology

Molecular and Evolutionary Determinants of Bacteriophage Host Range

(2018) Patrick A. de Jonge et al.   TRENDS IN MICROBIOLOGY

Identification of Two Regulators of Virulence That Are Conserved in Klebsiella pneumoniae Classical and Hypervirulent Strains

(2018) Michelle Palacios et al.   mBio

Complete genome analysis of a Siphoviridae phage TSK1 showing biofilm removal potential against Klebsiella pneumoniae

(2018) Rabia Tabassum et al.   Scientific Reports

The Anti-CRISPR Story: A Battle for Survival

(2017) Karen L. Maxwell   MOLECULAR CELL

MVP: a microbe–phage interaction database

(2017) Na L Gao et al.   NUCLEIC ACIDS RESEARCH

How to Name and Classify Your Phage: An Informal Guide

(2017) Evelien Adriaenssens et al.   Viruses-Basel

Stumbling across the Same Phage: Comparative Genomics of Widespread Temperate Phages Infecting the Fish Pathogen Vibrio anguillarum

(2017) Panos Kalatzis et al.   Viruses-Basel

The Discovery, Mechanisms, and Evolutionary Impact of Anti-CRISPRs

(2017) Adair L. Borges et al.   Annual Review of Virology

Klebsiella phages representing a novel clade of viruses with an unknown DNA modification and biotechnologically interesting enzymes

(2016) Barbara Maciejewska et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer

(2016) Ann C. Gregory et al.   BMC GENOMICS

Phosphorylation of spore coat proteins by a family of atypical protein kinases

(2016) Kim B. Nguyen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacteria vs. Bacteriophages: Parallel Evolution of Immune Arsenals

(2016) Muhammad A. B. Shabbir et al.   Frontiers in Microbiology

Genomics of Three New Bacteriophages Useful in the Biocontrol of Salmonella

(2016) Carlota Bardina et al.   Frontiers in Microbiology

Dark Matter of the Biosphere: the Amazing World of Bacteriophage Diversity

(2015) Graham F. Hatfull   JOURNAL OF VIROLOGY

A new perspective on lysogeny: prophages as active regulatory switches of bacteria

(2015) Ron Feiner et al.   NATURE REVIEWS MICROBIOLOGY

Old, new, and widely true: The bacteriophage T4 DNA packaging mechanism

(2015) Lindsay W. Black   VIROLOGY

Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity

(2015) Welkin H Pope et al.   eLife

Genomic comparison of 93 Bacillus phages reveals 12 clusters, 14 singletons and remarkable diversity

(2014) Julianne H Grose et al.   BMC GENOMICS

Systematic Identification of Hypothetical Bacteriophage Proteins Targeting Key Protein Complexes of Pseudomonas aeruginosa

(2014) An Van den Bossche et al.   JOURNAL OF PROTEOME RESEARCH

Understanding the enormous diversity of bacteriophages: The tailed phages that infect the bacterial family Enterobacteriaceae

(2014) Julianne H. Grose et al.   VIROLOGY

Bacteriophage Orphan DNA Methyltransferases: Insights from Their Bacterial Origin, Function, and Occurrence

(2013) James Murphy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacteriophage functional genomics and its role in bacterial pathogen detection

(2013) J. Klumpp et al.   Briefings in Functional Genomics

Structure of a bacterial type IV secretion core complex at subnanometre resolution

(2013) Angel Rivera-Calzada et al.   EMBO JOURNAL

Clinical relevance of the ESKAPE pathogens

(2013) Jack N Pendleton et al.   Expert Review of Anti-Infective Therapy

Superinfection Exclusion Is an Active Virus-Controlled Function That Requires a Specific Viral Protein

(2012) S. Y. Folimonova   JOURNAL OF VIROLOGY

The Adaptation of Temperate Bacteriophages to Their Host Genomes

(2012) Louis-Marie Bobay et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system

(2012) Joe Bondy-Denomy et al.   NATURE

Microbial virus genome annotation—Mustering the troops to fight the sequence onslaught

(2012) J. Rodney Brister et al.   VIROLOGY

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

Bacteriophages and their genomes

(2011) Graham F Hatfull et al.   Current Opinion in Virology

Helicobacter pylori proinflammatory protein up-regulates NF- B as a cell-translocating Ser/Thr kinase

(2010) D. J. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast and accurate automatic structure prediction with HHpred

(2009) Andrea Hildebrand et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

NMR solution structure of KP-TerB, a tellurite-resistance protein fromKlebsiella pneumoniae

(2008) Sheng-Kuo Chiang et al.   PROTEIN SCIENCE