标题
Prophage Hunter: an integrative hunting tool for active prophages
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
出版商
Oxford University Press (OUP)
发表日期
2019-05-17
DOI
10.1093/nar/gkz380
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Contemporary Phage Biology: From Classic Models to New Insights
- (2018) Gal Ofir et al. CELL
- Cross-genus rebooting of custom-made, synthetic bacteriophage genomes in L-form bacteria
- (2018) Samuel Kilcher et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MARVEL, a Tool for Prediction of Bacteriophage Sequences in Metagenomic Bins
- (2018) Deyvid Amgarten et al. Frontiers in Genetics
- Engineering Bacteriophages as Versatile Biologics
- (2018) Samuel Kilcher et al. TRENDS IN MICROBIOLOGY
- Phage Therapy: Going Temperate?
- (2018) Rodrigo Monteiro et al. TRENDS IN MICROBIOLOGY
- Lysogeny in nature: mechanisms, impact and ecology of temperate phages
- (2017) Cristina Howard-Varona et al. ISME Journal
- Genetic engineering of a temperate phage-based delivery system for CRISPR/Cas9 antimicrobials against Staphylococcus aureus
- (2017) Joo Youn Park et al. Scientific Reports
- VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data
- (2017) Jie Ren et al. Microbiome
- Prophage-mediated defence against viral attack and viral counter-defence
- (2017) Rebekah M. Dedrick et al. Nature Microbiology
- Genetic and life-history traits associated with the distribution of prophages in bacteria
- (2016) Marie Touchon et al. ISME Journal
- PHASTER: a better, faster version of the PHAST phage search tool
- (2016) David Arndt et al. NUCLEIC ACIDS RESEARCH
- MetaPhinder—Identifying Bacteriophage Sequences in Metagenomic Data Sets
- (2016) Vanessa Isabell Jurtz et al. PLoS One
- Inhibitory-based method for detection of Klebsiella pneumoniae carbapenemase Acinetobacter baumannii isolated from burn patients
- (2015) AbdolazizRastegar Lari et al. Indian Journal of Pathology and Microbiology
- StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
- (2015) Mihaela Pertea et al. NATURE BIOTECHNOLOGY
- Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
- (2015) Nuala A. O'Leary et al. NUCLEIC ACIDS RESEARCH
- Temperate and lytic bacteriophages programmed to sensitize and kill antibiotic-resistant bacteria
- (2015) Ido Yosef et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- Antibiotic trends of Klebsiella pneumoniae and Acinetobacter baumannii resistance indicators in an intensive care unit of Southern Italy, 2008–2013
- (2015) Antonella Agodi et al. Antimicrobial Resistance and Infection Control
- Genome-Based Identification of Active Prophage Regions by Next Generation Sequencing in Bacillus licheniformis DSM13
- (2015) Robert Hertel et al. PLoS One
- InterProScan 5: genome-scale protein function classification
- (2014) P. Jones et al. BIOINFORMATICS
- A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
- (2014) Bas E. Dutilh et al. Nature Communications
- Clostridium difficile phages: still difficult?
- (2014) Katherine R. Hargreaves et al. Frontiers in Microbiology
- Genetic modifications to temperate Enterococcus faecalis phage Ef11 that abolish the establishment of lysogeny and sensitivity to repressor, and increase host range and productivity of lytic infection
- (2013) H. Zhang et al. MICROBIOLOGY-SGM
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Differential analysis of gene regulation at transcript resolution with RNA-seq
- (2012) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies
- (2012) Sajia Akhter et al. NUCLEIC ACIDS RESEARCH
- PHAST: A Fast Phage Search Tool
- (2011) Y. Zhou et al. NUCLEIC ACIDS RESEARCH
- Carbapenem-resistant Acinetobacter baumannii and Klebsiella pneumoniae across a hospital system: impact of post-acute care facilities on dissemination
- (2010) F. Perez et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
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