Characteristics of microbial community composition and its relationship with carbon, nitrogen and sulfur in sediments

Thermoplasmata and Nitrososphaeria as dominant archaeal members in acid mine drainage sediment of Malanjkhand Copper Project, India

(2021) Abhishek Gupta et al.   ARCHIVES OF MICROBIOLOGY

Environmental stress destabilizes microbial networks

(2021) Damian J. Hernandez et al.   ISME Journal

Metabolic capabilities mute positive response to direct and indirect impacts of warming throughout the soil profile

(2021) Nicholas C. Dove et al.   Nature Communications

Silver Nanoparticles Alter Soil Microbial Community Compositions and Metabolite Profiles in Unplanted and Cucumber-Planted Soils

(2020) Huiling Zhang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Distinct mechanisms shape soil bacterial and fungal co-occurrence networks in a mountain ecosystem

(2020) Jiabao Li et al.   FEMS MICROBIOLOGY ECOLOGY

Potential utilization of terrestrially derived dissolved organic matter by aquatic microbial communities in saline lakes

(2020) Jian Yang et al.   ISME Journal

Effect of increasing of water level during the middle of dry season on landscape pattern of the two largest freshwater lakes of China

(2020) Haipeng Wu et al.   ECOLOGICAL INDICATORS

Four decades of wetland changes in Dongting Lake using Landsat observations during 1978–2018

(2020) Liu Yang et al.   JOURNAL OF HYDROLOGY

The host-associated archaeome

(2020) Guillaume Borrel et al.   NATURE REVIEWS MICROBIOLOGY

Upper Midwest lakes are supersaturated with N2

(2020) Brianna M. Loeks-Johnson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil acidification modifies soil depth-microbiome relationships in a no-till wheat cropping system

(2020) Daniel C. Schlatter et al.   SOIL BIOLOGY & BIOCHEMISTRY

Seasonal Microbial Community Characteristic and Its Driving Factors in a Copper Tailings Dam in the Chinese Loess Plateau

(2020) Tong Jia et al.   Frontiers in Microbiology

Broad‐scale distribution of diazotrophic communities is driven more by aridity index and temperature than by soil properties across various forests

(2020) Wenqiang Zhao et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Spatiotemporal water quality variations and their relationship with hydrological conditions in Dongting Lake after the operation of the Three Gorges Dam, China

(2020) Mingming Geng et al.   JOURNAL OF CLEANER PRODUCTION

Innovations to culturing the uncultured microbial majority

(2020) William H. Lewis et al.   NATURE REVIEWS MICROBIOLOGY

Changes in microbial biomass, community composition and diversity, and functioning with soil depth in two alpine ecosystems on the Tibetan plateau

(2020) Tianle Xu et al.   PLANT AND SOIL

Global diversity of microbial communities in marine sediment

(2020) Tatsuhiko Hoshino et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Changes in Methane Emission and Community Composition of Methane-Cycling Microorganisms Along an Elevation Gradient in the Dongting Lake Floodplain, China

(2020) Yijie Ren et al.   Atmosphere

Spatial patterns of microbial communities across surface waters of the Great Barrier Reef

(2020) Pedro R. Frade et al.   Communications Biology

Carbon and nitrogen cycling in Yedoma permafrost controlled by microbial functional limitations

(2020) Sylvain Monteux et al.   Nature Geoscience

Adaptive pathways of soil microorganisms to stoichiometric imbalances regulate microbial respiration following afforestation in the Loess Plateau, China

(2020) Zekun Zhong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Hidden heterogeneity and co‐occurrence networks of soil prokaryotic communities revealed at the scale of individual soil aggregates

(2020) Márton Szoboszlay et al.   MicrobiologyOpen

Characterization of microbial communities in sediments of the South Yellow Sea

(2020) Ye Chen et al.   Journal of Oceanology and Limnology

Dynamic changes in microbial communities and nutrient stoichiometry associated with soil aggregate structure in restored wetlands

(2020) Hu Cui et al.   CATENA

Bacterial communities involved directly or indirectly in the anaerobic degradation of cellulose

(2019) Yuanyuan Bao et al.   BIOLOGY AND FERTILITY OF SOILS

Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots

(2019) Samiran Banerjee et al.   ISME Journal

Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms

(2019) Spencer Diamond et al.   Nature Microbiology

A comprehensive census of lake microbial diversity on a global scale

(2019) Jian Yang et al.   Science China-Life Sciences

Functional Distribution of Bacterial Community under Different Land Use Patterns Based on FaProTax Function Prediction

(2019) Shichun Liang et al.   POLISH JOURNAL OF ENVIRONMENTAL STUDIES

Determination of vertical and horizontal assemblage drivers of bacterial community in a heavily polluted urban river

(2019) Wenlong Zhang et al.   WATER RESEARCH

Saline stress modifies the effect of cadmium toxicity on soil archaeal communities

(2019) Meng Wang et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Depth-Dependent Patterns of Bacterial Communities and Assembly Processes in a Typical Red Soil Critical Zone

(2019) Huayong Wu et al.   GEOMICROBIOLOGY JOURNAL

Suppressed N fixation and diazotrophs after four decades of fertilization

(2019) Kunkun Fan et al.   Microbiome

Isotopic evidence revealing spatial heterogeneity for source and composition of sedimentary organic matters in Taihu Lake, China

(2019) Zhichun Li et al.   ECOLOGICAL INDICATORS

Microbial community and geochemical analyses of trans-trench sediments for understanding the roles of hadal environments

(2019) Satoshi Hiraoka et al.   ISME Journal

Biogeographic patterns of microbial association networks in paddy soil within Eastern China

(2019) Xiaoling Wan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Niche differentiation rather than biogeography shapes the diversity and composition of microbiome of Cycas panzhihuaensis

(2019) Ying Zheng et al.   Microbiome

Reveal the response of enzyme activities to heavy metals through in situ zymography

(2018) Chengjiao Duan et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Metabolic potential and in situ transcriptomic profiles of previously uncharacterized key microbial groups involved in coupled carbon, nitrogen and sulfur cycling in anoxic marine zones

(2018) Alvaro M. Plominsky et al.   ENVIRONMENTAL MICROBIOLOGY

Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis

(2018) Alexander Crits-Christoph et al.   NATURE

A comparison of the ability of PLFA and 16S rRNA gene metabarcoding to resolve soil community change and predict ecosystem functions

(2018) K.H. Orwin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Archaea Are Interactive Components of Complex Microbiomes

(2018) Christine Moissl-Eichinger et al.   TRENDS IN MICROBIOLOGY

Variations in bacterial and archaeal communities along depth profiles of Alaskan soil cores

(2018) Binu Mani Tripathi et al.   Scientific Reports

Effect of tillage and static abiotic soil properties on microbial diversity

(2018) Fabienne Legrand et al.   APPLIED SOIL ECOLOGY

Soil microbiomes with distinct assemblies through vertical soil profiles drive the cycling of multiple nutrients in reforested ecosystems

(2018) Shuo Jiao et al.   Microbiome

Influence of resistance breeding in common bean on rhizosphere microbiome composition and function

(2017) Lucas William Mendes et al.   ISME Journal

Metagenomic analysis of microbiota structure evolution in phytoremediation of a swine lagoon wastewater

(2016) Jianfeng Ye et al.   BIORESOURCE TECHNOLOGY

Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China

(2016) Bin Ma et al.   ISME Journal

Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra

(2016) Hye Min Kim et al.   JOURNAL OF MICROBIOLOGY

Decoupling function and taxonomy in the global ocean microbiome

(2016) S. Louca et al.   SCIENCE

Long-term successional dynamics of microbial association networks in anaerobic digestion processes

(2016) Linwei Wu et al.   WATER RESEARCH

Single-Cell Genome and Group-Specific dsrAB Sequencing Implicate Marine Members of the Class Dehalococcoidia (Phylum Chloroflexi ) in Sulfur Cycling

(2016) Kenneth Wasmund et al.   mBio

Profiling of Sediment Microbial Community in Dongting Lake before and after Impoundment of the Three Gorges Dam

(2016) Wei Huang et al.   International Journal of Environmental Research and Public Health

Conductive Fe3O4 Nanoparticles Accelerate Syntrophic Methane Production from Butyrate Oxidation in Two Different Lake Sediments

(2016) Jianchao Zhang et al.   Frontiers in Microbiology

Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling

(2015) Cindy J. Castelle et al.   CURRENT BIOLOGY

Phylogenetic congruence and ecological coherence in terrestrial Thaumarchaeota

(2015) Eduard Vico Oton et al.   ISME Journal

Metagenomic and network analysis reveal wide distribution and co-occurrence of environmental antibiotic resistance genes

(2015) Bing Li et al.   ISME Journal

The role of seedling recruitment from juvenile populations of Carex brevicuspis (Cyperaceae) at the Dongting Lake wetlands, China

(2015) Zheng-miao Deng et al.   Scientific Reports

The impact of Three Gorges Dam on the downstream eco-hydrological environment and vegetation distribution of East Dongting Lake

(2014) Yong-hong Xie et al.   Ecohydrology

A global inventory of lakes based on high-resolution satellite imagery

(2014) Charles Verpoorter et al.   GEOPHYSICAL RESEARCH LETTERS

Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin

(2014) Anne-Kristin Kaster et al.   ISME Journal

Changes in extracellular enzyme activity and microbial community structure with soil depth at the Luquillo Critical Zone Observatory

(2014) M.M. Stone et al.   SOIL BIOLOGY & BIOCHEMISTRY

Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage

(2013) Mohamed F. Haroon et al.   NATURE

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil

(2012) Kathryn G. Eilers et al.   SOIL BIOLOGY & BIOCHEMISTRY

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Linking allochthonous dissolved organic matter and boreal lake sediment carbon sequestration: The role of light-mediated flocculation

(2010) Eddie von Wachenfeldt et al.   LIMNOLOGY AND OCEANOGRAPHY

Sedimentation in Boreal Lakes—The Role of Flocculation of Allochthonous Dissolved Organic Matter in the Water Column

(2008) Eddie von Wachenfeldt et al.   ECOSYSTEMS