Soil microbiomes with distinct assemblies through vertical soil profiles drive the cycling of multiple nutrients in reforested ecosystems

Plant growth and oil contamination alter the diversity and composition of bacterial communities in agricultural soils across China

(2018) Shuo Jiao et al.   LAND DEGRADATION & DEVELOPMENT

Afforestation neutralizes soil pH

(2018) Songbai Hong et al.   Nature Communications

Biogeography and ecological diversity patterns of rare and abundant bacteria in oil-contaminated soils

(2017) Shuo Jiao et al.   MOLECULAR ECOLOGY

Temporal dynamics of microbial communities in microcosms in response to pollutants

(2017) Shuo Jiao et al.   MOLECULAR ECOLOGY

Genomic features of bacterial adaptation to plants

(2017) Asaf Levy et al.   NATURE GENETICS

Embracing the unknown: disentangling the complexities of the soil microbiome

(2017) Noah Fierer   NATURE REVIEWS MICROBIOLOGY

Response of soil microbial community dynamics to Robinia pseudoacacia L. afforestation in the loess plateau: a chronosequence approach

(2017) Jinliang Liu et al.   PLANT AND SOIL

Soil networks become more connected and take up more carbon as nature restoration progresses

(2017) Elly Morriën et al.   Nature Communications

Long-term Fertilization Structures Bacterial and Archaeal Communities along Soil Depth Gradient in a Paddy Soil

(2017) Yunfu Gu et al.   Frontiers in Microbiology

Bacterial community dissimilarity between the surface and subsurface soils equals horizontal differences over several kilometers in the western Tibetan Plateau

(2016) Haiyan Chu et al.   ENVIRONMENTAL MICROBIOLOGY

Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China

(2016) Bin Ma et al.   ISME Journal

Ecological succession reveals potential signatures of marine–terrestrial transition in salt marsh fungal communities

(2016) Francisco Dini-Andreote et al.   ISME Journal

Microbial regulation of the soil carbon cycle: evidence from gene–enzyme relationships

(2016) Pankaj Trivedi et al.   ISME Journal

An oligotrophic deep-subsurface community dependent on syntrophy is dominated by sulfur-driven autotrophic denitrifiers

(2016) Maggie C. Y. Lau et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global biogeography of microbial nitrogen-cycling traits in soil

(2016) Michaeline B. Nelson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil bacterial community dynamics reflect changes in plant community and soil properties during the secondary succession of abandoned farmland in the Loess Plateau

(2016) Chao Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Bacterial communities in oil contaminated soils: Biogeography and co-occurrence patterns

(2016) Shuo Jiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial diversity drives multifunctionality in terrestrial ecosystems

(2016) Manuel Delgado-Baquerizo et al.   Nature Communications

Microbial succession in response to pollutants in batch-enrichment culture

(2016) Shuo Jiao et al.   Scientific Reports

Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling

(2015) Cindy J. Castelle et al.   CURRENT BIOLOGY

Temporal and spatial influences incur reconfiguration of Arctic heathland soil bacterial community structure

(2015) Richard Hill et al.   ENVIRONMENTAL MICROBIOLOGY

Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages

(2015) Laura A. Hug et al.   ENVIRONMENTAL MICROBIOLOGY

Long-term soil transplant simulating climate change with latitude significantly alters microbial temporal turnover

(2015) Yuting Liang et al.   ISME Journal

Deterministic processes vary during community assembly for ecologically dissimilar taxa

(2015) Jeff R. Powell et al.   Nature Communications

Biodiversity enhances ecosystem multifunctionality across trophic levels and habitats

(2015) Jonathan S. Lefcheck et al.   Nature Communications

Plant diversity increases soil microbial activity and soil carbon storage

(2015) Markus Lange et al.   Nature Communications

The links between ecosystem multifunctionality and above- and belowground biodiversity are mediated by climate

(2015) Xin Jing et al.   Nature Communications

Taxonomical and functional microbial community selection in soybean rhizosphere

(2014) Lucas W Mendes et al.   ISME Journal

Dynamics of bacterial community succession in a salt marsh chronosequence: evidences for temporal niche partitioning

(2014) Francisco Dini-Andreote et al.   ISME Journal

Belowground biodiversity and ecosystem functioning

(2014) Richard D. Bardgett et al.   NATURE

Soil biodiversity and soil community composition determine ecosystem multifunctionality

(2014) C. Wagg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Change in deep soil microbial communities due to long-term fertilization

(2014) Chenhua Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

How to Fight Back Against Antibiotic Resistance

(2013) Gautam Dantas et al.   AMERICAN SCIENTIST

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Application of Natural Blends of Phytochemicals Derived from the Root Exudates ofArabidopsisto the Soil Reveal That Phenolic-related Compounds Predominantly Modulate the Soil Microbiome

(2013) Dayakar V. Badri et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage

(2013) Mohamed F. Haroon et al.   NATURE

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Root Exudation of Phytochemicals in Arabidopsis Follows Specific Patterns That Are Developmentally Programmed and Correlate with Soil Microbial Functions

(2013) Jacqueline M. Chaparro et al.   PLoS One

Soil food web properties explain ecosystem services across European land use systems

(2013) F. T. de Vries et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Manipulating the soil microbiome to increase soil health and plant fertility

(2012) Jacqueline M. Chaparro et al.   BIOLOGY AND FERTILITY OF SOILS

Plant Species Richness and Ecosystem Multifunctionality in Global Drylands

(2012) F. T. Maestre et al.   SCIENCE

Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil

(2012) Kathryn G. Eilers et al.   SOIL BIOLOGY & BIOCHEMISTRY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Effects of selected root exudate components on soil bacterial communities

(2011) Shengjing Shi et al.   FEMS MICROBIOLOGY ECOLOGY

Disentangling the importance of ecological niches from stochastic processes across scales

(2011) J. M. Chase et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Assembly history dictates ecosystem functioning: evidence from wood decomposer communities

(2010) Tadashi Fukami et al.   ECOLOGY LETTERS

Life history determines biogeographical patterns of soil bacterial communities over multiple spatial scales

(2010) A. BISSETT et al.   MOLECULAR ECOLOGY

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial, archaeal and eukaryal community structures throughout soil horizons of harvested and naturally disturbed forest stands

(2009) Martin Hartmann et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial succession in a glacier foreland of the High Arctic

(2009) Ursel M E Schütte et al.   ISME Journal

A safe operating space for humanity

(2009) Johan Rockström et al.   NATURE

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE

Forests and Climate Change: Forcings, Feedbacks, and the Climate Benefits of Forests

(2008) G. B. Bonan   SCIENCE