标题
Reconstruction and dynamics of the human intestinal microbiome observed In Situ
作者
关键词
Diurnal rhythm, Reconstruction, Metagenome, Metatranscriptome, Metabolome, Transendoscopic enteral tubing
出版物
Engineering
Volume -, Issue -, Pages -
出版商
Elsevier BV
发表日期
2021-05-07
DOI
10.1016/j.eng.2021.03.015
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Mechanisms, Evaluation, and Management of Chronic Constipation
- (2020) Adil E. Bharucha et al. GASTROENTEROLOGY
- Nod2 influences microbial resilience and susceptibility to colitis following antibiotic exposure
- (2019) A. Goethel et al. Mucosal Immunology
- Fecal microbiota from patients with cirrhosis has a low capacity to ferment non‐digestible carbohydrates into short chain fatty acids
- (2019) Mingliang Jin et al. LIVER INTERNATIONAL
- Long-Term Safety and Efficacy of Fecal Microbiota Transplant in Active Ulcerative Colitis
- (2019) Xiao Ding et al. DRUG SAFETY
- Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans
- (2019) Abigail J. Johnson et al. Cell Host & Microbe
- Mapping human microbiome drug metabolism by gut bacteria and their genes
- (2019) Michael Zimmermann et al. NATURE
- Microbiomes as sources of emergent host phenotypes
- (2019) J. B. Lynch et al. SCIENCE
- The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3
- (2019) Zheng Kuang et al. SCIENCE
- Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs
- (2019) Katharine Michelle Ng et al. Cell Host & Microbe
- Understanding immune–microbiota interactions in the intestine
- (2019) Philip P. Ahern et al. IMMUNOLOGY
- Efficacy of drugs in chronic idiopathic constipation: a systematic review and network meta-analysis
- (2019) Pavit Luthra et al. Lancet Gastroenterology & Hepatology
- Antibiotic-induced microbiome perturbations are associated with significant alterations to colonic mucosal immunity in rhesus macaques
- (2019) Jennifer A. Manuzak et al. Mucosal Immunology
- Transient Osmotic Perturbation Causes Long-Term Alteration to the Gut Microbiota
- (2018) Carolina Tropini et al. CELL
- Microbiota derived short chain fatty acids promote histone crotonylation in the colon through histone deacetylases
- (2018) Rachel Fellows et al. Nature Communications
- Gut Microbiota-Derived Short Chain Fatty Acids Induce Circadian Clock Entrainment in Mouse Peripheral Tissue
- (2018) Yu Tahara et al. Scientific Reports
- Microbial Biogeography Along the Gastrointestinal Tract of a Red Panda
- (2018) Yan Zeng et al. Frontiers in Microbiology
- Understanding the Representative Gut Microbiota Dysbiosis in Metformin-Treated Type 2 Diabetes Patients Using Genome-Scale Metabolic Modeling
- (2018) Dorines Rosario et al. Frontiers in Physiology
- Stability of the human faecal microbiome in a cohort of adult men
- (2018) Raaj S. Mehta et al. Nature Microbiology
- Dynamics of metatranscription in the inflammatory bowel disease gut microbiome
- (2018) Melanie Schirmer et al. Nature Microbiology
- Metagenomic insights into resistant starch degradation by human gut microbiota
- (2018) Marius Vital et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Alterations and structural resilience of the gut microbiota under dietary fat perturbations
- (2018) Cong Liu et al. JOURNAL OF NUTRITIONAL BIOCHEMISTRY
- Extensive impact of non-antibiotic drugs on human gut bacteria
- (2018) Lisa Maier et al. NATURE
- Gut Bacterial Microbiota and its Resistome Rapidly Recover to Basal State Levels after Short-term Amoxicillin-Clavulanic Acid Treatment in Healthy Adults
- (2018) Chad W. MacPherson et al. Scientific Reports
- The circadian clock regulates the diurnal levels of microbial short-chain fatty acids and their rhythmic effects on colon contractility in mice
- (2018) Anneleen Segers et al. Acta Physiologica
- Stability and resilience of the intestinal microbiota in children in daycare – a 12 month cohort study
- (2018) Martin Steen Mortensen et al. BMC MICROBIOLOGY
- Resilience of human gut microbial communities for the long stay with multiple dietary shifts
- (2018) Hong Liu et al. GUT
- Long-term impact of oral vancomycin, ciprofloxacin and metronidazole on the gut microbiota in healthy humans
- (2018) Bastiaan W Haak et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Species-level functional profiling of metagenomes and metatranscriptomes
- (2018) Eric A. Franzosa et al. NATURE METHODS
- The intestinal microbiota regulates body composition through NFIL3 and the circadian clock
- (2017) Yuhao Wang et al. SCIENCE
- mixOmics: An R package for ‘omics feature selection and multiple data integration
- (2017) Florian Rohart et al. PLoS Computational Biology
- Reduced Abundance of Butyrate-Producing Bacteria Species in the Fecal Microbial Community in Crohn's Disease
- (2016) Kenichiro Takahashi et al. DIGESTION
- A strategy for the targeted metabolomics analysis of 11 gut microbiota-host co-metabolites in rat serum, urine and feces by ultra high performance liquid chromatography–tandem mass spectrometry
- (2016) Waner Hou et al. JOURNAL OF CHROMATOGRAPHY A
- Durable coexistence of donor and recipient strains after fecal microbiota transplantation
- (2016) Simone S. Li et al. SCIENCE
- Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity
- (2016) Alexandra Zhernakova et al. SCIENCE
- Population-level analysis of gut microbiome variation
- (2016) Gwen Falony et al. SCIENCE
- Antibiotic-Induced Changes in the Intestinal Microbiota and Disease
- (2016) Simone Becattini et al. TRENDS IN MOLECULAR MEDICINE
- Biogeography of the Intestinal Mucosal and Lumenal Microbiome in the Rhesus Macaque
- (2015) Koji Yasuda et al. Cell Host & Microbe
- Gut biogeography of the bacterial microbiota
- (2015) Gregory P. Donaldson et al. NATURE REVIEWS MICROBIOLOGY
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Diet rapidly and reproducibly alters the human gut microbiome
- (2013) Lawrence A. David et al. NATURE
- Diversity, stability and resilience of the human gut microbiota
- (2012) Catherine A. Lozupone et al. NATURE
- Metagenomic microbial community profiling using unique clade-specific marker genes
- (2012) Nicola Segata et al. NATURE METHODS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- The human microbiome: ecosystem resilience and health
- (2012) David A Relman NUTRITION REVIEWS
- Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry
- (2011) Warwick B Dunn et al. Nature Protocols
- Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes
- (2011) G. D. Wu et al. SCIENCE
- Bacterial biogeography of the human digestive tract
- (2011) Jennifer C. Stearns et al. Scientific Reports
- Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine
- (2009) Petra Louis et al. FEMS MICROBIOLOGY LETTERS
- Inhibition of histone-deacetylase activity by short-chain fatty acids and some polyphenol metabolites formed in the colon
- (2008) Markus Waldecker et al. JOURNAL OF NUTRITIONAL BIOCHEMISTRY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now