First genomic prediction and genome‐wide association for complex growth‐related traits in Rock Bream (Oplegnathus fasciatus)

Genome sequence of the barred knifejaw Oplegnathus fasciatus (Temminck & Schlegel, 1844): the first chromosome-level draft genome in the family Oplegnathidae

(2019) Yongshuang Xiao et al.   GigaScience

Genome-Wide Association Study of Growth and Body-Shape-Related Traits in Large Yellow Croaker (Larimichthys crocea) Using ddRAD Sequencing

(2019) Zhixiong Zhou et al.   MARINE BIOTECHNOLOGY

Genome-Wide Association Study and Cost-Efficient Genomic Predictions for Growth and Fillet Yield in Nile Tilapia (Oreochromis niloticus)

(2019) Grazyella M. Yoshida et al.   G3-Genes Genomes Genetics

First Genome-wide Association Analysis for Growth Traits in the Largest Coral Reef-Dwelling Bony Fishes, the Giant Grouper (Epinephelus lanceolatus)

(2019) Lina Wu et al.   MARINE BIOTECHNOLOGY

Evaluation of Genomic Selection for Seven Economic Traits in Yellow Drum (Nibea albiflora)

(2019) Guijia Liu et al.   MARINE BIOTECHNOLOGY

Accurate genomic predictions for BCWD resistance in rainbow trout are achieved using low-density SNP panels: Evidence that long-range LD is a major contributing factor

(2018) Roger L. Vallejo et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Genomic Selection Using BayesCπ and GBLUP for Resistance Against Edwardsiella tarda in Japanese Flounder (Paralichthys olivaceus)

(2018) Yang Liu et al.   MARINE BIOTECHNOLOGY

Genomic Predictions and Genome-Wide Association Study of Resistance Against Piscirickettsia salmonis in Coho Salmon ( Oncorhynchus kisutch ) Using ddRAD Sequencing

(2018) Agustín Barría et al.   G3-Genes Genomes Genetics

Population Genetic Structure of Rock Bream (Oplegnathus fasciatus Temminck & Schlegel, 1884) Revealed by mtDNA COI Sequence in Korea and China

(2018) Hyun Suk Park et al.   Ocean Science Journal

Accuracy of Genomic Evaluations of Juvenile Growth Rate in Common Carp (Cyprinus carpio) Using Genotyping by Sequencing

(2018) Christos Palaiokostas et al.   Frontiers in Genetics

Predicting Growth Traits with Genomic Selection Methods in Zhikong Scallop (Chlamys farreri)

(2018) Yangfan Wang et al.   MARINE BIOTECHNOLOGY

Genomic Selection for Growth Traits in Pacific Oyster (Crassostrea gigas): Potential of Low-Density Marker Panels for Breeding Value Prediction

(2018) Alejandro P. Gutierrez et al.   Frontiers in Genetics

First draft genome sequence of the rock bream in the family Oplegnathidae

(2018) Younhee Shin et al.   Scientific Data

A Genome-Wide Association Study Reveals That Genes with Functions for Bone Development Are Associated with Body Conformation in Catfish

(2017) Xin Geng et al.   MARINE BIOTECHNOLOGY

Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery

(2017) John M Hickey et al.   NATURE GENETICS

Genomic Prediction Accuracy for Resistance Against Piscirickettsia salmonis in Farmed Rainbow Trout

(2017) Grazyella M. Yoshida et al.   G3-Genes Genomes Genetics

The E3 ubiquitin ligase Hace1 is required for early embryonic development in Xenopus laevis

(2016) Akira Iimura et al.   BMC DEVELOPMENTAL BIOLOGY

Genomic Prediction of Resistance to Pasteurellosis in Gilthead Sea Bream (Sparus aurata) Using 2b-RAD Sequencing

(2016) C. Palaiokostas et al.   G3-Genes Genomes Genetics

Genome-Assisted Prediction of Quantitative Traits Using the R Package sommer

(2016) Giovanny Covarrubias-Pazaran   PLoS One

Evaluation of the 2b-RAD method for genomic selection in scallop breeding

(2016) Jinzhuang Dou et al.   Scientific Reports

Genome wide association and genomic prediction for growth traits in juvenile farmed Atlantic salmon using a high density SNP array

(2015) Hsin-Yuan Tsai et al.   BMC GENOMICS

Perspectives for Genomic Selection Applications and Research in Plants

(2015) Nicolas Heslot et al.   CROP SCIENCE

Genomic selection for boar taint compounds and carcass traits in a commercial pig population

(2015) Carolina Filardi de Campos et al.   Livestock Science

Genomic selection in wheat: optimum allocation of test resources and comparison of breeding strategies for line and hybrid breeding

(2015) C. Friedrich H. Longin et al.   THEORETICAL AND APPLIED GENETICS

Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

(2015) Jennifer Spindel et al.   PLoS Genetics

Genome-Wide Association Study (GWAS) for Growth Rate and Age at Sexual Maturation in Atlantic Salmon (Salmo salar)

(2015) Alejandro P. Gutierrez et al.   PLoS One

Rock bream (Oplegnathus fasciatus) viperin is a virus-responsive protein that modulates innate immunity and promotes resistance against megalocytivirus infection

(2014) Bao-cun Zhang et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Genome-Wide Regression and Prediction with the BGLR Statistical Package

(2014) P. Perez et al.   GENETICS

Impact of Genotype Imputation on the Performance of GBLUP and Bayesian Methods for Genomic Prediction

(2014) Liuhong Chen et al.   PLoS One

Genomic selection prediction accuracy in a perennial crop: case study of oil palm (Elaeis guineensis Jacq.)

(2014) David Cros et al.   THEORETICAL AND APPLIED GENETICS

Recent advances of genome mapping and marker-assisted selection in aquaculture

(2013) Gen Hua Yue   FISH AND FISHERIES

Development and characterization of novel microsatellite markers in the rock bream fish Oplegnathus fasciatus

(2013) X.X. Sun et al.   GENETICS AND MOLECULAR RESEARCH

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Chromosomal mapping of microsatellite repeats in the rock bream fish Oplegnathus fasciatus, with emphasis of their distribution in the neo-Y chromosome

(2013) Dongdong Xu et al.   Molecular Cytogenetics

Accelerating Improvement of Livestock with Genomic Selection

(2013) Theo Meuwissen et al.   Annual Review of Animal Biosciences

GAPIT: genome association and prediction integrated tool

(2012) Alexander E. Lipka et al.   BIOINFORMATICS

Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.)

(2012) M. F. R. Resende et al.   GENETICS

Genome-wide association study (GWAS) of resistance to head smut in maize

(2012) Ming Wang et al.   PLANT SCIENCE

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

Nrac, a Novel Nutritionally-Regulated Adipose and Cardiac-Enriched Gene

(2012) Ren Zhang et al.   PLoS One

Occurrence of Barred Knifejaw, Oplegnathus Fasciatus (Actinopterygii: Perciformes: Oplegnathidae), in Malta (Central Mediterranean) with a Discussion on Possible Modes of Entry

(2011) Patrick J. Schembri et al.   ACTA ICHTHYOLOGICA ET PISCATORIA

Extension of the bayesian alphabet for genomic selection

(2011) David Habier et al.   BMC BIOINFORMATICS

Genomic selection for maternal traits in pigs

(2011) M. Lillehammer et al.   JOURNAL OF ANIMAL SCIENCE

Reliability of direct genomic values for animals with different relationships within and to the reference population

(2011) M. Pszczola et al.   JOURNAL OF DAIRY SCIENCE

Genome partitioning of genetic variation for complex traits using common SNPs

(2011) Jian Yang et al.   NATURE GENETICS

Use of a reduced set of single nucleotide polymorphisms for genetic evaluation of resistance to Salmonella carrier state in laying hens

(2011) A. Legarra et al.   POULTRY SCIENCE

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Accuracy of estimated genomic breeding values for wool and meat traits in a multi-breed sheep population

(2010) H. D. Daetwyler et al.   Animal Production Science

KIF26A Is an Unconventional Kinesin and Regulates GDNF-Ret Signaling in Enteric Neuronal Development

(2009) Ruyun Zhou et al.   CELL

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

The Bayesian Lasso

(2008) Trevor Park et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION