Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

Multiple major QTL lead to stable yield performance of rice cultivars across varying drought intensities

(2014) Shalabh Dixit et al.   BMC GENETICS

Bridging the gap between marker-assisted and genomic selection of heading time and plant height in hybrid wheat

(2014) Y Zhao et al.   HEREDITY

The impact of population structure on genomic prediction in stratified populations

(2014) Zhigang Guo et al.   THEORETICAL AND APPLIED GENETICS

Genomic selection in sugar beet breeding populations

(2013) Tobias Würschum et al.   BMC GENETICS

Relatedness and Genotype × Environment Interaction Affect Prediction Accuracies in Genomic Selection: A Study in Cassava

(2013) Delphine Ly et al.   CROP SCIENCE

Genomewide Selection when Major Genes Are Known

(2013) Rex Bernardo   CROP SCIENCE

Optimal Design of Preliminary Yield Trials with Genome-Wide Markers

(2013) Jeffrey B. Endelman et al.   CROP SCIENCE

Genomic Predictability of Interconnected Biparental Maize Populations

(2013) C. Riedelsheimer et al.   GENETICS

Potential and Optimization of Genomic Selection for Fusarium Head Blight Resistance in Six-Row Barley

(2012) A. J. Lorenz et al.   CROP SCIENCE

Genomewide Selection versus Marker-assisted Recurrent Selection to Improve Grain Yield and Stover-quality Traits for Cellulosic Ethanol in Maize

(2012) Jon M. Massman et al.   CROP SCIENCE

Genome-wide selection in cassava

(2012) Eder Jorge de Oliveira et al.   EUPHYTICA

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Evaluation of Genomic Prediction Methods for Fusarium Head Blight Resistance in Wheat

(2012) Jessica Rutkoski et al.   Plant Genome

Genomic Prediction of Genetic Values for Resistance to Wheat Rusts

(2012) Leonardo Ornella et al.   Plant Genome

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

A large-effect QTL for rice grain yield under upland drought stress on chromosome 1

(2011) R. Venuprasad et al.   MOLECULAR BREEDING

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Evaluation of genome-wide selection efficiency in maize nested association mapping populations

(2011) Zhigang Guo et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Genomic Selection Accuracy using Multifamily Prediction Models in a Wheat Breeding Program

(2011) Elliot L. Heffner et al.   Plant Genome

Accuracy and Training Population Design for Genomic Selection on Quantitative Traits in Elite North American Oats

(2011) Franco G. Asoro et al.   Plant Genome

Genetic Architecture of Aluminum Tolerance in Rice (Oryza sativa) Determined through Genome-Wide Association Analysis and QTL Mapping

(2011) Adam N. Famoso et al.   PLoS Genetics

Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

(2010) J. Crossa et al.   GENETICS

Use of Wrapper Algorithms Coupled with a Random Forests Classifier for Variable Selection in Large-Scale Genomic Association Studies

(2010) Andrei S. Rodin et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Genomic Diversity and Introgression in O. sativa Reveal the Impact of Domestication and Breeding on the Rice Genome

(2010) Keyan Zhao et al.   PLoS One

Additive Genetic Variability and the Bayesian Alphabet

(2009) D. Gianola et al.   GENETICS

Invited review: Genomic selection in dairy cattle: Progress and challenges

(2009) B.J. Hayes et al.   JOURNAL OF DAIRY SCIENCE

Genetic Properties of the Maize Nested Association Mapping Population

(2009) M. D. McMullen et al.   SCIENCE

Reproducing Kernel Hilbert Spaces Regression Methods for Genomic Assisted Prediction of Quantitative Traits

(2008) D. Gianola et al.   GENETICS

Marker-assisted selection: an approach for precision plant breeding in the twenty-first century

(2007) B. C.Y Collard et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES