Transcriptome analysis reveals immune pathways underlying resistance in the common carp Cyprinus carpio against the oomycete Aphanomyces invadans

CXCR3 Ligands in Cancer and Autoimmunity, Chemoattraction of Effector T Cells, and Beyond

(2020) Nathan Karin   Frontiers in Immunology

The Small GTPase Arf6: An Overview of Its Mechanisms of Action and of Its Role in Host–Pathogen Interactions and Innate Immunity

(2019) Tim Van Acker et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptome comparative analysis of immune tissues from asymptomatic and diseased Epinephelus moara naturally infected with nervous necrosis virus

(2019) Linna Wang et al.   FISH & SHELLFISH IMMUNOLOGY

Impacts of epizootic ulcerative syndrome on subsistence fisheries and wildlife

(2019) B. HERBERT et al.   REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES

Different transcriptional response between susceptible and resistant common carp (Cyprinus carpio) fish hints on the mechanism of CyHV-3 disease resistance

(2019) Roni Tadmor-Levi et al.   BMC GENOMICS

Basal polarization of the immune responses to Streptococcus agalactiae susceptible and resistant tilapia ( Oreochromis niloticus)

(2018) Jiajie Zhu et al.   FISH & SHELLFISH IMMUNOLOGY

Regulation of innate immune functions by guanylate-binding proteins

(2018) Gerrit J.K. Praefcke   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Antifungal Innate Immunity: A Perspective from the Last 10 Years

(2018) Fabián Salazar et al.   Journal of Innate Immunity

Necklace: combining reference and assembled transcriptomes for more comprehensive RNA-Seq analysis

(2018) Nadia M Davidson et al.   GigaScience

Transcriptome analysis of the critically endangered Dabry's sturgeon (Acipenser dabryanus) head kidney response to Aeromonas hydrophila

(2018) Kai Luo et al.   FISH & SHELLFISH IMMUNOLOGY

Proteome Profiles of Head Kidney and Spleen of Rainbow Trout (Oncorhynchus Mykiss )

(2018) Gokhlesh Kumar et al.   PROTEOMICS

A comparative transcriptome approach for identification of molecular changes in Aphanomyces invadans infected Channa striatus

(2018) Venkatesh Kumaresan et al.   MOLECULAR BIOLOGY REPORTS

Crk adaptor proteins mediate actin-dependent T cell migration and mechanosensing induced by the integrin LFA-1

(2018) Nathan H. Roy et al.   Science Signaling

Inflammasome-Independent Role of NLRP3 Mediates Mitochondrial Regulation in Renal Injury

(2018) Su-Mi Kim et al.   Frontiers in Immunology

Transcriptomic analysis of spleen infected with infectious salmon anemia virus reveals distinct pattern of viral replication on resistant and susceptible Atlantic salmon ( Salmo salar )

(2017) Phillip Dettleff et al.   FISH & SHELLFISH IMMUNOLOGY

CCR2 Regulates the Immune Response by Modulating the Interconversion and Function of Effector and Regulatory T Cells

(2017) Eszter Bakos et al.   JOURNAL OF IMMUNOLOGY

Highly Selective Cleavage of Cytokines and Chemokines by the Human Mast Cell Chymase and Neutrophil Cathepsin G

(2017) Zhirong Fu et al.   JOURNAL OF IMMUNOLOGY

The Diverse Family of Arp2/3 Complexes

(2017) Javier Pizarro-Cerdá et al.   TRENDS IN CELL BIOLOGY

Histological confirmation of epizootic ulcerative syndrome in two cyprinid species from Lake Liambezi, Zambezi Region, Namibia

(2017) Kyle J. McHugh et al.   AFRICAN ZOOLOGY

Innate immune response against an oomycete pathogen Aphanomyces invadans in common carp (Cyprinus carpio), a fish resistant to epizootic ulcerative syndrome

(2016) Manoj K. Yadav et al.   ACTA TROPICA

Gamma-interferon-inducible lysosomal thiol reductase is upregulated in human melanoma

(2016) Jennifer Nguyen et al.   MELANOMA RESEARCH

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Dynamin-Actin Cross Talk Contributes to Phagosome Formation and Closure

(2016) Florence Marie-Anaïs et al.   TRAFFIC

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Genome-wide SNP identification for the construction of a high-resolution genetic map of Japanese flounder (Paralichthys olivaceus): applications to QTL mapping of Vibrio anguillarum disease resistance and comparative genomic analysis

(2015) C. Shao et al.   DNA RESEARCH

IL-18 Triggered by the Nlrp3 Inflammasome Induces Host Innate Resistance in a Pulmonary Model of Fungal Infection

(2015) Natália Ketelut-Carneiro et al.   JOURNAL OF IMMUNOLOGY

NOD-Like Receptors: Versatile Cytosolic Sentinels

(2015) Vinicius Motta et al.   PHYSIOLOGICAL REVIEWS

Phosphoinositide 3-kinase enables phagocytosis of large particles by terminating actin assembly through Rac/Cdc42 GTPase-activating proteins

(2015) Daniel Schlam et al.   Nature Communications

Turning Up the Heat: Inflammasome Activation by Fungal Pathogens

(2015) Aldo Henrique Tavares et al.   PLoS Pathogens

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Innate immune response of Indian major carp, Labeo rohita infected with oomycete pathogen Aphanomyces invadans

(2014) Manoj K. Yadav et al.   FISH & SHELLFISH IMMUNOLOGY

Role of Pathogen-Derived Cell Wall Carbohydrates and Prostaglandin E2in Immune Response and Suppression of Fish Immunity by the Oomycete Saprolegnia parasitica

(2014) Rodrigo Belmonte et al.   INFECTION AND IMMUNITY

Normalization of RNA-seq data using factor analysis of control genes or samples

(2014) Davide Risso et al.   NATURE BIOTECHNOLOGY

RNA-Seq Technology and Its Application in Fish Transcriptomics

(2014) Xi Qian et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Reciprocal functions of Cryptococcus neoformans copper homeostasis machinery during pulmonary infection and meningoencephalitis

(2014) Tian-Shu Sun et al.   Nature Communications

Pathways of Antigen Processing

(2013) Janice S. Blum et al.   Annual Review of Immunology

CARD9: at the intersection of mucosal and systemic antifungal immunity

(2013) M. S. Lionakis et al.   BLOOD

Molecular cloning and expression analysis of major histocompatibility complex class I, IIA and IIB genes of blunt snout bream (Megalobrama amblycephala)

(2013) Wei Luo et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Of inflammasomes and pathogens - sensing of microbes by the inflammasome

(2013) Franz Bauernfeind et al.   EMBO Molecular Medicine

Pathogenic Fungus Microsporum canis Activates the NLRP3 Inflammasome

(2013) Liming Mao et al.   INFECTION AND IMMUNITY

Gene Deletion of Gabarap Enhances Nlrp3 Inflammasome-Dependent Inflammatory Responses

(2013) Z. Zhang et al.   JOURNAL OF IMMUNOLOGY

Activation of caspase-1 by the NLRP3 inflammasome regulates the NADPH oxidase NOX2 to control phagosome function

(2013) Anna Sokolovska et al.   NATURE IMMUNOLOGY

NLRP12 Suppresses Colon Inflammation and Tumorigenesis through the Negative Regulation of Noncanonical NF-κB Signaling

(2012) Irving C. Allen et al.   IMMUNITY

The Inflammasome NLRs in Immunity, Inflammation, and Associated Diseases

(2011) Beckley K. Davis et al.   Annual Review of Immunology

Identification of putative cathepsin S in mangrove red snapper Lutjanus argentimaculatus and its role in antigen presentation

(2011) Jin Zhou et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

PA28 and the proteasome immunosubunits play a central and independent role in the production of MHC class I-binding peptides in vivo

(2011) Natascha de Graaf et al.   EUROPEAN JOURNAL OF IMMUNOLOGY

Receptor-like Tyrosine Phosphatases CD45 and CD148 Have Distinct Functions in Chemoattractant-Mediated Neutrophil Migration and Response to S. aureus

(2011) Jing W. Zhu et al.   IMMUNITY

Extracellular heat shock protein 90 plays a role in translocating chaperoned antigen from endosome to proteasome for generating antigenic peptide to be cross-presented by dendritic cells

(2011) J. Oura et al.   INTERNATIONAL IMMUNOLOGY

Impaired NK-cell migration in WAS/XLT patients: role of Cdc42/WASp pathway in the control of chemokine-induced  2 integrin high-affinity state

(2010) H. Stabile et al.   BLOOD

An Essential Role for the NLRP3 Inflammasome in Host Defense against the Human Fungal Pathogen Candida albicans

(2009) Amy G. Hise et al.   Cell Host & Microbe

Syk kinase signalling couples to the Nlrp3 inflammasome for anti-fungal host defence

(2009) Olaf Gross et al.   NATURE

Structural arrangement of the transmission interface in the antigen ABC transport complex TAP

(2009) G. Oancea et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fungal killing by mammalian phagocytic cells

(2008) André Moraes Nicola et al.   CURRENT OPINION IN MICROBIOLOGY