Genome-wide SNP identification for the construction of a high-resolution genetic map of Japanese flounder (Paralichthys olivaceus): applications to QTL mapping of Vibrio anguillarum disease resistance and comparative genomic analysis

Assembly and Function of the Major Histocompatibility Complex (MHC) I Peptide-loading Complex Are Conserved Across Higher Vertebrates

(2014) Andreas Hinz et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Genome Scan for Quantitative Trait Loci Associated with Vibrio anguillarum Infection Resistance in Japanese Flounder (Paralichthys olivaceus) by Bulked Segregant Analysis

(2014) Lei Wang et al.   MARINE BIOTECHNOLOGY

Neighboring Genes Show Interchromosomal Colocalization after Their Separation

(2014) Zhiming Dai et al.   MOLECULAR BIOLOGY AND EVOLUTION

Whole-genome duplication in teleost fishes and its evolutionary consequences

(2014) Stella M. K. Glasauer et al.   MOLECULAR GENETICS AND GENOMICS

The Adaptable Major Histocompatibility Complex (MHC) Fold: Structure and Function of Nonclassical and MHC Class I–Like Molecules

(2013) Erin J. Adams et al.   Annual Review of Immunology

Lep-MAP: fast and accurate linkage map construction for large SNP datasets

(2013) Pasi Rastas et al.   BIOINFORMATICS

Comparative genomic analysis of catfish linkage group 8 reveals two homologous chromosomes in zebrafish and other teleosts with extensive inter-chromosomal rearrangements

(2013) Yu Zhang et al.   BMC GENOMICS

Whole genome comparative analysis of channel catfish (Ictalurus punctatus) with four model fish species

(2013) Yanliang Jiang et al.   BMC GENOMICS

Progressive Recombination Suppression and Differentiation in Recently Evolved Neo-sex Chromosomes

(2013) Heini M. Natri et al.   MOLECULAR BIOLOGY AND EVOLUTION

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Genetic Map Construction and Quantitative Trait Locus (QTL) Detection of Growth-Related Traits in Litopenaeus vannamei for Selective Breeding Applications

(2013) Farafidy Andriantahina et al.   PLoS One

Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

(2012) Huaan Yang et al.   BMC GENOMICS

High-Throughput SNP Discovery and Genotyping for Constructing a Saturated Linkage Map of Chickpea (Cicer arietinum L.)

(2012) R. Gaur et al.   DNA RESEARCH

Genetic Linkage Map of Olive Flounder, Paralichthys olivaceus

(2012) Jung-Ha Kang et al.   International Journal of Biological Sciences

RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species-diagnostic SNP assays

(2012) STEPHEN J. AMISH et al.   Molecular Ecology Resources

A RAD Tag Derived Marker Based Eggplant Linkage Map and the Location of QTLs Determining Anthocyanin Pigmentation

(2012) Lorenzo Barchi et al.   PLoS One

Construction of High-Density Genetic Linkage Maps and Mapping of Growth-Related Quantitative Trail Loci in the Japanese Flounder (Paralichthys olivaceus)

(2012) Wentao Song et al.   PLoS One

Paired-end RAD-seq for de novo assembly and marker design without available reference

(2011) Eva-Maria Willing et al.   BIOINFORMATICS

Detection of QTL with effects on osmoregulation capacities in the rainbow trout (Oncorhynchus mykiss)

(2011) Yvan Le Bras et al.   BMC GENETICS

Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley

(2011) Yada Chutimanitsakun et al.   BMC GENOMICS

Polymorphism and Balancing Selection of MHC Class II DAB Gene in 7 Selective Flounder (Paralichthys olivaceus) Families

(2011) Min Du et al.   Evidence-based Complementary and Alternative Medicine

Linkage Mapping of Toll-Like Receptors (TLRs) in Japanese Flounder, Paralichthys olivaceus

(2011) Seong Don Hwang et al.   MARINE BIOTECHNOLOGY

Repetitive DNA and next-generation sequencing: computational challenges and solutions

(2011) Todd J. Treangen et al.   NATURE REVIEWS GENETICS

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

A second generation genetic linkage map of Japanese flounder (Paralichthys olivaceus)

(2010) Cecilia Castano-Sanchez et al.   BMC GENOMICS

MHC class IIα gene polymorphism and its association with resistance/susceptibility to Vibrio anguillarum in Japanese flounder (Paralichthys olivaceus)

(2010) Tian-jun Xu et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Allelic variation, balancing selection and positive selected sites detected from MHC class Iα gene of olive flounder

(2010) Tian-jun Xu et al.   GENETICA

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

DNA transposons and the role of recombination in mutation accumulation in Daphnia pulex

(2010) Sarah Schaack et al.   GENOME BIOLOGY

A Gene-Based Linkage Map for Bicyclus anynana Butterflies Allows for a Comprehensive Analysis of Synteny with the Lepidopteran Reference Genome

(2009) Patrícia Beldade et al.   PLoS Genetics

MHC polymorphism and disease resistance to Vibrio anguillarum in 12 selective Japanese flounder (Paralichthys olivaceus) families

(2008) T XU et al.   FISH & SHELLFISH IMMUNOLOGY

A Genomic Scan for Selection Reveals Candidates for Genes Involved in the Evolution of Cultivated Sunflower (Helianthus annuus)

(2008) M. A. Chapman et al.   PLANT CELL

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One

The evolution of restricted recombination in sex chromosomes

(2008) Roberta Bergero et al.   TRENDS IN ECOLOGY & EVOLUTION