Alternative dietary protein and water temperature influence the skin and gut microbial communities of yellowtail kingfish (Seriola lalandi)

Partial Evaluation of Autochthonous Probiotic Potential of the Gut Microbiota of Seriola lalandi

(2019) Carolina Ramírez et al.   Probiotics and Antimicrobial Proteins

A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome

(2019) Thibault P.R.A. Legrand et al.   Reviews in Aquaculture

Mucus glycosylation, immunity and bacterial microbiota associated to the skin of experimentally ulcered gilthead seabream ( Sparus aurata )

(2018) Silvana Teresa Tapia-Paniagua et al.   FISH & SHELLFISH IMMUNOLOGY

Inducing Subacute Enteritis in Yellowtail Kingfish Seriola lalandi : the Effect of Dietary Inclusion of Soybean Meal and Grape Seed Extract on Hindgut Morphology and Inflammation

(2018) David A. J. Stone et al.   NORTH AMERICAN JOURNAL OF AQUACULTURE

Next generation sequencing for gut microbiome characterization in rainbow trout (Oncorhynchus mykiss) fed animal by-product meals as an alternative to fishmeal protein sources

(2018) Simona Rimoldi et al.   PLoS One

The Inner Workings of the Outer Surface: Skin and Gill Microbiota as Indicators of Changing Gut Health in Yellowtail Kingfish

(2018) Thibault P. R. A. Legrand et al.   Frontiers in Microbiology

The Gut Microbiota of Marine Fish

(2018) Sian Egerton et al.   Frontiers in Microbiology

A Single Vibrionales 16S rRNA Oligotype Dominates the Intestinal Microbiome in Two Geographically Separated Atlantic cod Populations

(2018) Even S. Riiser et al.   Frontiers in Microbiology

Interpopulation Variation in the Atlantic Salmon Microbiome Reflects Environmental and Genetic Diversity

(2018) Tamsyn M. Uren Webster et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of temperature and dietary lipid proportion on gut microbiota in yellowtail kingfish Seriola lalandi juveniles

(2018) Ernesto Larios Soriano et al.   AQUACULTURE

Exposure to Yeast Shapes the Intestinal Bacterial Community Assembly in Zebrafish Larvae

(2018) Prabhugouda Siriyappagouder et al.   Frontiers in Microbiology

Diet and diet-associated bacteria shape early microbiome development in Yellowtail Kingfish (Seriola lalandi )

(2018) Jackson Wilkes Walburn et al.   Microbial Biotechnology

Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics

(2017) A.M. Tarnecki et al.   JOURNAL OF APPLIED MICROBIOLOGY

Progress in fish gastrointestinal microbiota research

(2017) An R. Wang et al.   Reviews in Aquaculture

The Microbiome of Seriola lalandi of Wild and Aquaculture Origin Reveals Differences in Composition and Potential Function

(2017) Carolina Ramírez et al.   Frontiers in Microbiology

The Skin-Mucus Microbial Community of Farmed Atlantic Salmon (Salmo salar)

(2017) Giusi Minniti et al.   Frontiers in Microbiology

Under Pressure: Interactions between Commensal Microbiota and the Teleost Immune System

(2017) Cecelia Kelly et al.   Frontiers in Immunology

Salmonid alphavirus infection causes skin dysbiosis in Atlantic salmon (Salmo salar L.) post-smolts

(2017) Kristin M. Reid et al.   PLoS One

Influence of Fishmeal-Free Diets on Microbial Communities in Atlantic Salmon (Salmo salar) Recirculation Aquaculture Systems

(2016) Victor Schmidt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Alternative Protein Sources in the Diet Modulate Microbiota and Functionality in the Distal Intestine of Atlantic Salmon (Salmo salar)

(2016) Karina Gajardo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Partial fish meal replacement by soy protein concentrate, squid and algal meals in low fish-oil diets containing Schizochytrium limacinum for longfin yellowtail Seriola rivoliana

(2016) Karma R. Kissinger et al.   AQUACULTURE

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

(2016) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Bacterial symbiosis in the fish gut and its role in health and metabolism

(2016) Goutam Banerjee et al.   SYMBIOSIS

A high-resolution map of the gut microbiota in Atlantic salmon (Salmo salar): A basis for comparative gut microbial research

(2016) Karina Gajardo et al.   Scientific Reports

Topographical Mapping of the Rainbow Trout (Oncorhynchus mykiss) Microbiome Reveals a Diverse Bacterial Community with Antifungal Properties in the Skin

(2015) Liam Lowrey et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of dietary components on the gut microbiota of aquatic animals. A never-ending story?

(2015) E. Ringø et al.   AQUACULTURE NUTRITION

Impact of Fishmeal Replacement in Diets for Gilthead Sea Bream (Sparus aurata) on the Gastrointestinal Microbiota Determined by Pyrosequencing the 16S rRNA Gene

(2015) G. Estruch et al.   PLoS One

China's aquaculture and the world's wild fisheries

(2015) L. Cao et al.   SCIENCE

Fish to 2030: The Role and Opportunity for Aquaculture

(2015) Mimako Kobayashi et al.   AQUACULTURE ECONOMICS & MANAGEMENT

Feed Matters: Satisfying the Feed Demand of Aquaculture

(2015) Albert G. J. Tacon et al.   Reviews in Fisheries Science & Aquaculture

Comparative Evaluation of DNA Extraction Methods from Feces of Multiple Host Species for Downstream Next-Generation Sequencing

(2015) Marcia L. Hart et al.   PLoS One

The effect of dietary soybean meal and soy protein concentrate on the intestinal mucus layer and development of subacute enteritis in Yellowtail Kingfish (Seriola lalandi) at suboptimal water temperature

(2014) M.S. Bansemer et al.   AQUACULTURE NUTRITION

The Earth Microbiome project: successes and aspirations

(2014) Jack A Gilbert et al.   BMC BIOLOGY

Evaluation of the effect of commercially available plant and animal protein sources in diets for Atlantic salmon (Salmo salar L.): digestive and metabolic investigations

(2014) Mali Hartviksen et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

The use of a soy product in juvenile yellowtail kingfish (Seriola lalandi) feeds at different water temperatures: 2. Soy protein concentrate

(2013) Jenna N. Bowyer et al.   AQUACULTURE

Diversity of the skin microbiota of fishes: evidence for host species specificity

(2013) Andrea Larsen et al.   FEMS MICROBIOLOGY ECOLOGY

The mucosal immune system of fish: The evolution of tolerating commensals while fighting pathogens

(2013) Daniela Gomez et al.   FISH & SHELLFISH IMMUNOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Teleost skin, an ancient mucosal surface that elicits gut-like immune responses

(2013) Z. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dietary soybean protein concentrate-induced intestinal disorder in marine farmed Atlantic salmon, Salmo salar is associated with alterations in gut microbiota

(2013) Timothy J. Green et al.   VETERINARY MICROBIOLOGY

Searching for Solutions in Aquaculture: Charting a Sustainable Course

(2012) Dane Klinger et al.   Annual Review of Environment and Resources

Effects of plant-based diets on the distal gut microbiome of rainbow trout (Oncorhynchus mykiss)

(2012) Atul R. Desai et al.   AQUACULTURE

Enzyme-producing bacteria isolated from fish gut: a review

(2012) A.K. Ray et al.   AQUACULTURE NUTRITION

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Sustainable aquafeeds: Progress towards reduced reliance upon marine ingredients in diets for farmed Atlantic salmon (Salmo salar L.)

(2011) Eldar Åsgard Bendiksen et al.   AQUACULTURE

Utilization of plant proteins in fish diets: effects of global demand and supplies of fishmeal

(2010) Ronald W Hardy   AQUACULTURE RESEARCH

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The routine metabolic rate of mulloway (Argyrosomus japonicus: Sciaenidae) and yellowtail kingfish (Seriola lalandi: Carangidae) acclimated to six different temperatures

(2009) Igor Pirozzi et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Effects of chitosan-coated diet on improving water quality and innate immunity in the olive flounder, Paralichthys olivaceus

(2008) Seon-Heui Cha et al.   AQUACULTURE

Lysozyme: an important defence molecule of fish innate immune system

(2008) Shailesh Saurabh et al.   AQUACULTURE RESEARCH