The Microbiome of Seriola lalandi of Wild and Aquaculture Origin Reveals Differences in Composition and Potential Function

Evaluation of marine psychrophile, Psychrobacter namhaensis SO89, as a probiotic in Nile tilapia ( Oreochromis niloticus ) diets

(2017) Sarah O. Makled et al.   FISH & SHELLFISH IMMUNOLOGY

Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics

(2017) A.M. Tarnecki et al.   JOURNAL OF APPLIED MICROBIOLOGY

Fine Flounder (Paralichthys adspersus) Microbiome Showed Important Differences between Wild and Reared Specimens

(2017) Carolina Ramírez et al.   Frontiers in Microbiology

Influence of Fishmeal-Free Diets on Microbial Communities in Atlantic Salmon (Salmo salar) Recirculation Aquaculture Systems

(2016) Victor Schmidt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Alternative Protein Sources in the Diet Modulate Microbiota and Functionality in the Distal Intestine of Atlantic Salmon (Salmo salar)

(2016) Karina Gajardo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The gut microbiome and degradation enzyme activity of wild freshwater fishes influenced by their trophic levels

(2016) Han Liu et al.   Scientific Reports

Transition from freshwater to seawater reshapes the skin-associated microbiota of Atlantic salmon

(2016) Jep Lokesh et al.   Scientific Reports

A high-resolution map of the gut microbiota in Atlantic salmon (Salmo salar): A basis for comparative gut microbial research

(2016) Karina Gajardo et al.   Scientific Reports

The Microbiota of Freshwater Fish and Freshwater Niches Contain Omega-3 Fatty Acid-Producing Shewanella Species

(2015) Frank E. Dailey et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A new view of the fish gut microbiome: Advances from next-generation sequencing

(2015) Mahdi Ghanbari et al.   AQUACULTURE

Selection in the host structures the microbiota associated with developing cod larvae (Gadus morhua)

(2015) Ingrid Bakke et al.   ENVIRONMENTAL MICROBIOLOGY

Probiotics and prebiotics associated with aquaculture: A review

(2015) Najeeb Akhter et al.   FISH & SHELLFISH IMMUNOLOGY

Impact of Fishmeal Replacement in Diets for Gilthead Sea Bream (Sparus aurata) on the Gastrointestinal Microbiota Determined by Pyrosequencing the 16S rRNA Gene

(2015) G. Estruch et al.   PLoS One

The treatment with the probiotic Shewanella putrefaciens Pdp11 of specimens of Solea senegalensis exposed to high stocking densities to enhance their resistance to disease

(2014) S.T. Tapia-Paniagua et al.   FISH & SHELLFISH IMMUNOLOGY

Comparative Analysis of the Intestinal Bacterial Communities in Different Species of Carp by Pyrosequencing

(2014) Tongtong Li et al.   MICROBIAL ECOLOGY

Antarctic microorganisms as source of the omega-3 polyunsaturated fatty acids

(2014) Ana Clara Bianchi et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries

(2014) Martin S. Llewellyn et al.   Frontiers in Microbiology

Dietary differences are reflected on the gut prokaryotic community structure of wild and commercially reared sea bream (Sparus aurata)

(2014) Konstantinos A. Kormas et al.   MicrobiologyOpen

Effects of dietary supplementation of potential probioticBacillus subtilisVSG1 singularly or in combination withLactobacillus plantarumVSG3 or/andPseudomonas aeruginosaVSG2 on the growth, immunity and disease resistance ofLabeo rohita

(2013) S.S. Giri et al.   AQUACULTURE NUTRITION

Next generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single location

(2013) Bastiaan Star et al.   BMC MICROBIOLOGY

Prebiotic effects of arabinoxylan oligosaccharides on juvenile Siberian sturgeon (Acipenser baerii) with emphasis on the modulation of the gut microbiota using 454 pyrosequencing

(2013) Zahra Geraylou et al.   FEMS MICROBIOLOGY ECOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Isolation of bacterial probiotic candidates from the gastrointestinal tract of rainbow trout, Oncorhynchus mykiss (Walbaum), and screening for inhibitory activity against Flavobacterium psychrophilum

(2012) D R Burbank et al.   JOURNAL OF FISH DISEASES

Microbial 16S rRNA Ion Tag and community metagenome sequencing using the Ion Torrent (PGM) Platform

(2012) Andrew S. Whiteley et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

(2012) KAREN E. SULLAM et al.   MOLECULAR ECOLOGY

Composition, Diversity, and Origin of the Bacterial Community in Grass Carp Intestine

(2012) Shangong Wu et al.   PLoS One

Pseudomonas sp. M174 inhibits the fish pathogen Flavobacterium psychrophilum

(2011) T.L. Korkea-aho et al.   JOURNAL OF APPLIED MICROBIOLOGY

The Ecology, Biology and Pathogenesis of Acinetobacter spp.: An Overview

(2011) Hamuel James Doughari et al.   MICROBES AND ENVIRONMENTS

Enhancing the stress responses of probiotics for a lifestyle from gut to product and back again

(2011) Susan Mills et al.   Microbial Cell Factories

Experimental and analytical tools for studying the human microbiome

(2011) Justin Kuczynski et al.   NATURE REVIEWS GENETICS

Coenzyme Q10 Contents in Foods and Fortification Strategies

(2010) Igor Pravst et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Probiotics and immunity: A fish perspective

(2010) S.K. Nayak   FISH & SHELLFISH IMMUNOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular characterizations of chloramphenicol- and oxytetracycline-resistant bacteria and resistance genes in mariculture waters of China

(2009) Hongyue Dang et al.   MARINE POLLUTION BULLETIN

Analysis of bacterial populations in the gut of developing cod larvae and identification of Vibrio logei, Vibrio anguillarum and Vibrio splendidus as pathogens of cod larvae

(2008) Helen I. Reid et al.   AQUACULTURE

Low stress response exhibited by juvenile yellowtail kingfish (Seriola lalandiValenciennes) exposed to hypercapnic conditions associated with transportation

(2008) Damian Moran et al.   AQUACULTURE RESEARCH

Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.)

(2008) P. Navarrete et al.   MICROBIAL ECOLOGY