ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining
出版年份 2020 全文链接
标题
ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
出版商
Oxford University Press (OUP)
发表日期
2020-04-30
DOI
10.1093/nar/gkaa374
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- A Deep Learning Approach to Antibiotic Discovery
- (2020) Jonathan M. Stokes et al. CELL
- antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
- (2019) Kai Blin et al. NUCLEIC ACIDS RESEARCH
- A deep learning genome-mining strategy for biosynthetic gene cluster prediction
- (2019) Geoffrey D Hannigan et al. NUCLEIC ACIDS RESEARCH
- A computational framework to explore large-scale biosynthetic diversity
- (2019) Jorge C. Navarro-Muñoz et al. Nature Chemical Biology
- The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery
- (2019) Jeffrey A. van Santen et al. ACS Central Science
- Self-Resistance of Natural Product Producers: Past, Present, and Future Focusing on Self-Resistant Protein Variants
- (2018) Khaled H. Almabruk et al. ACS Chemical Biology
- Thailandamide: a fatty acid synthesis antibiotic that is co-expressed with a resistant target gene.
- (2018) Christopher E. Wozniak et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
- (2018) Chao Zhang et al. BMC BIOINFORMATICS
- Future Directions of Marine Myxobacterial Natural Product Discovery Inferred from Metagenomics
- (2018) Ronald Garcia et al. Marine Drugs
- Resistance-gene-directed discovery of a natural-product herbicide with a new mode of action
- (2018) Yan Yan et al. NATURE
- The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters
- (2018) Kai Blin et al. NUCLEIC ACIDS RESEARCH
- The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery
- (2017) Mohammad Alanjary et al. NUCLEIC ACIDS RESEARCH
- PRISM 3: expanded prediction of natural product chemical structures from microbial genomes
- (2017) Michael A. Skinnider et al. NUCLEIC ACIDS RESEARCH
- The evolution of genome mining in microbes – a review
- (2016) Nadine Ziemert et al. NATURAL PRODUCT REPORTS
- Lifemap: Exploring the Entire Tree of Life
- (2016) Damien M. de Vienne PLOS BIOLOGY
- A new view of the tree of life
- (2016) Laura A. Hug et al. Nature Microbiology
- Identification of Thiotetronic Acid Antibiotic Biosynthetic Pathways by Target-directed Genome Mining
- (2015) Xiaoyu Tang et al. ACS Chemical Biology
- Production of the Bengamide Class of Marine Natural Products in Myxobacteria: Biosynthesis and Structure-Activity Relationships
- (2015) Silke C. Wenzel et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- The re-emergence of natural products for drug discovery in the genomics era
- (2015) Alan L. Harvey et al. NATURE REVIEWS DRUG DISCOVERY
- HGTree: database of horizontally transferred genes determined by tree reconciliation
- (2015) Hyeonsoo Jeong et al. NUCLEIC ACIDS RESEARCH
- Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
- (2015) Nuala A. O'Leary et al. NUCLEIC ACIDS RESEARCH
- In vitro reconstitution of indolmycin biosynthesis reveals the molecular basis of oxazolinone assembly
- (2015) Yi-Ling Du et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Directed natural product biosynthesis gene cluster capture and expression in the model bacterium Bacillus subtilis
- (2015) Yongxin Li et al. Scientific Reports
- Ornithine Transcarbamylase ArgK Plays a Dual role for the Self-defense of Phaseolotoxin Producing Pseudomonas syringae pv. phaseolicola
- (2015) Li chen et al. Scientific Reports
- Targeted metagenomics as a tool to tap into marine natural product diversity for the discovery and production of drug candidates
- (2015) Marla Trindade et al. Frontiers in Microbiology
- Cystobactamids: Myxobacterial Topoisomerase Inhibitors Exhibiting Potent Antibacterial Activity
- (2014) Sascha Baumann et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
- (2014) Peter Cimermancic et al. CELL
- Multilocus Sequence Typing Reveals Evidence of Homologous Recombination Linked to Antibiotic Resistance in the Genus Salinispora
- (2013) Kelle C. Freel et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Natural products: A continuing source of novel drug leads
- (2013) Gordon M. Cragg et al. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
- Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?
- (2013) Brian O. Bachmann et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Identifying producers of antibacterial compounds by screening for antibiotic resistance
- (2013) Maulik N Thaker et al. NATURE BIOTECHNOLOGY
- DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1.
- (2013) Hao Luo et al. NUCLEIC ACIDS RESEARCH
- Myxobacterium-Produced Antibiotic TA (Myxovirescin) Inhibits Type II Signal Peptidase
- (2012) Yao Xiao et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Natural Products As Sources of New Drugs over the 30 Years from 1981 to 2010
- (2012) David J. Newman et al. JOURNAL OF NATURAL PRODUCTS
- TIGRFAMs and Genome Properties in 2013
- (2012) Daniel H. Haft et al. NUCLEIC ACIDS RESEARCH
- Phylogeny and molecular signatures for the phylum Thermotogae and its subgroups
- (2011) Radhey S. Gupta et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- The Kalimantacin/Batumin Biosynthesis Operon Encodes a Self-Resistance Isoform of the FabI Bacterial Target
- (2010) Wesley Mattheus et al. CHEMISTRY & BIOLOGY
- Caldilinea tarbellica sp. nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin
- (2010) P. Gregoire et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Myxobacterial secondary metabolites: bioactivities and modes-of-action
- (2010) Kira J. Weissman et al. NATURAL PRODUCT REPORTS
- Thirteen posttranslational modifications convert a 14-residue peptide into the antibiotic thiocillin
- (2009) Laura C. Wieland Brown et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Andrimid producers encode an acetyl-CoA carboxyltransferase subunit resistant to the action of the antibiotic
- (2008) X. Liu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation