TIGRFAMs and Genome Properties in 2013

Cell Contact–Dependent Outer Membrane Exchange in Myxobacteria: Genetic Determinants and Mechanism

(2012) Darshankumar T. Pathak et al.   PLoS Genetics

Chemistry and Biology of the Copper Chelator Methanobactin

(2011) Grace E. Kenney et al.   ACS Chemical Biology

ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process

(2011) Malay K Basu et al.   BMC BIOINFORMATICS

Archaeosortases and Exosortases Are Widely Distributed Systems Linking Membrane Transit with Posttranslational Modification

(2011) D. H. Haft et al.   JOURNAL OF BACTERIOLOGY

Biological Systems Discovery In Silico: Radical S-Adenosylmethionine Protein Families and Their Target Peptides for Posttranslational Modification

(2011) D. H. Haft et al.   JOURNAL OF BACTERIOLOGY

Evolution and classification of the CRISPR–Cas systems

(2011) Kira S. Makarova et al.   NATURE REVIEWS MICROBIOLOGY

InterPro in 2011: new developments in the family and domain prediction database

(2011) S. Hunter et al.   NUCLEIC ACIDS RESEARCH

CharProtDB: a database of experimentally characterized protein annotations

(2011) R. Madupu et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

GlyGly-CTERM and Rhombosortase: A C-Terminal Protein Processing Signal in a Many-to-One Pairing with a Rhomboid Family Intramembrane Serine Protease

(2011) Daniel H. Haft et al.   PLoS One

A Comparison of Methanobactins fromMethylosinus trichosporiumOB3b andMethylocystisStrain SB2 Predicts Methanobactins Are Synthesized from Diverse Peptide Precursors Modified To Create a Common Core for Binding and Reducing Copper Ions

(2010) Benjamin D. Krentz et al.   BIOCHEMISTRY

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

The comprehensive microbial resource

(2009) Tanja Davidsen et al.   NUCLEIC ACIDS RESEARCH

Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies

(2009) Alexandra M. Schnoes et al.   PLoS Computational Biology

Orphan SelD proteins and selenium-dependent molybdenum hydroxylases

(2008) Daniel H Haft et al.   Biology Direct