Transcriptome Analysis of the Sydney Rock Oyster, Saccostrea glomerata: Insights into Molluscan Immunity
出版年份 2016 全文链接
标题
Transcriptome Analysis of the Sydney Rock Oyster, Saccostrea glomerata: Insights into Molluscan Immunity
作者
关键词
Oysters, Transcriptome analysis, Molluscs, Immune response, Apoptosis, Toll-like receptors, STAT proteins, Defensins
出版物
PLoS One
Volume 11, Issue 6, Pages e0156649
出版商
Public Library of Science (PLoS)
发表日期
2016-06-04
DOI
10.1371/journal.pone.0156649
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Gonad transcriptome analysis of pearl oyster Pinctada margaritifera: identification of potential sex differentiation and sex determining genes
- (2014) Vaihiti Teaniniuraitemoana et al. BMC GENOMICS
- Identification, expression, and responses to bacterial challenge of the cathepsin C gene from the razor clam Sinonovacula constricta
- (2014) Donghong Niu et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- TIR-domain-containing protein repertoire of nine anthozoan species reveals coral–specific expansions and uncharacterized proteins
- (2014) Angela Z. Poole et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- The specifically enhanced cellular immune responses in Pacific oyster (Crassostrea gigas) against secondary challenge with Vibrio splendidus
- (2014) Tao Zhang et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Toll signal transduction pathway in bivalves: Complete cds of intermediate elements and related gene transcription levels in hemocytes of immune stimulated Mytilus galloprovincialis
- (2014) Mylène Toubiana et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Characteristic and functional analysis of a ficolin-like protein from the oyster Crassostrea hongkongensis
- (2014) Zhiming Xiang et al. FISH & SHELLFISH IMMUNOLOGY
- The transcriptomic response to copper exposure by the gill tissue of Japanese scallops (Mizuhopecten yessoensis) using deep-sequencing technology
- (2014) Xiaolin Meng et al. FISH & SHELLFISH IMMUNOLOGY
- Molecular cloning and characterization of cathepsin L from freshwater mussel, Cristaria plicata
- (2014) Xiaojuan Hu et al. FISH & SHELLFISH IMMUNOLOGY
- Deep transcriptome sequencing of Pecten maximus hemocytes: A genomic resource for bivalve immunology
- (2014) Marianna Pauletto et al. FISH & SHELLFISH IMMUNOLOGY
- Next generation sequence analysis of the transcriptome of Sydney rock oysters (Saccostrea glomerata) exposed to a range of environmental stressors
- (2014) Sharon E. Hook et al. Marine Genomics
- The Anadara trapezia transcriptome: A resource for molluscan physiological genomics
- (2014) Peter J. Prentis et al. Marine Genomics
- De novo transcriptomic profile in the gonadal tissues of the intertidal whelk Reishia clavigera
- (2014) Kevin K.Y. Ho et al. MARINE POLLUTION BULLETIN
- Alternative splicing and immune response of Crassostrea gigas tumor necrosis factor receptor-associated factor 3
- (2014) Baoyu Huang et al. MOLECULAR BIOLOGY REPORTS
- Descriptive epidemiology of mass mortality due to Ostreid herpesvirus-1 (OsHV-1) in commercially farmed Pacific oysters (Crassostrea gigas) in the Hawkesbury River estuary, Australia
- (2013) I. Paul-Pont et al. AQUACULTURE
- mRNA-Seq and microarray development for the Grooved carpet shell clam, Ruditapes decussatus: a functional approach to unravel host -parasite interaction
- (2013) Ricardo B Leite et al. BMC GENOMICS
- Toll-like receptors and MyD88 adaptors in Mytilus: Complete cds and gene expression levels
- (2013) Mylène Toubiana et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Identification of cathepsin B in the razor clam Sinonovacula constricta and its role in innate immune responses
- (2013) Donghong Niu et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Identification and function of two myeloid differentiation factor 88 variants in triangle-shell pearl mussel (Hyriopsis cumingii)
- (2013) Qian Ren et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Effects of RNA interference-mediated knock-down of hypoxia-inducible factor-α on respiratory burst activity of the Pacific oyster Crassostrea gigas hemocytes
- (2013) Seung Hyuk Choi et al. FISH & SHELLFISH IMMUNOLOGY
- Gene identification and recombinant protein of a lysozyme from freshwater mussel Cristaria plicata
- (2013) Dan Wu et al. FISH & SHELLFISH IMMUNOLOGY
- The first Toll receptor from the triangle-shell pearl mussel Hyriopsis cumingii
- (2013) Qian Ren et al. FISH & SHELLFISH IMMUNOLOGY
- The thioredoxin antioxidant system
- (2013) Jun Lu et al. FREE RADICAL BIOLOGY AND MEDICINE
- Toll-like receptors (TLRs) in aquatic animals: Signaling pathways, expressions and immune responses
- (2013) Pradipta R. Rauta et al. IMMUNOLOGY LETTERS
- Reactive Oxygen Species in the Immune System
- (2013) Yuhui Yang et al. INTERNATIONAL REVIEWS OF IMMUNOLOGY
- Transcriptome Analysis Reveals a Rich Gene Set Related to Innate Immunity in the Eastern Oyster (Crassostrea virginica)
- (2013) Linlin Zhang et al. MARINE BIOTECHNOLOGY
- The complexity of NF-κB signaling in inflammation and cancer
- (2013) Bastian Hoesel et al. Molecular Cancer
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- De Novo Transcriptome Sequence Assembly and Analysis of RNA Silencing Genes of Nicotiana benthamiana
- (2013) Kenlee Nakasugi et al. PLoS One
- Coming out of the Shell: Building the Molecular Infrastructure for Research on Parasite-Harbouring Snails
- (2013) Cinzia Cantacessi et al. PLoS Neglected Tropical Diseases
- Changes in the transcriptional expression of oxidative stress response genes in Akoya pearl oysters (Pinctada fucata) exposed to air and mechanical agitation
- (2012) Rhiannon P. Kuchel et al. AQUACULTURE
- Transcriptional response of lysozyme, metallothionein, and superoxide dismutase to combined exposure to heavy metals and bacteria in Mactra veneriformis
- (2012) Yan Fang et al. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY
- Research progress on the mollusc immunity in China
- (2012) Lingling Wang et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Draft Genome of the Pearl Oyster Pinctada fucata: A Platform for Understanding Bivalve Biology
- (2012) T. Takeuchi et al. DNA RESEARCH
- Indicators of environmental stress: cellular biomarkers and reproductive responses in the Sydney rock oyster (Saccostrea glomerata)
- (2012) Katelyn J. Edge et al. ECOTOXICOLOGY
- Pattern recognition receptors acting in innate immune system of shrimp against pathogen infections
- (2012) Xian-Wei Wang et al. FISH & SHELLFISH IMMUNOLOGY
- A review on antioxidants, prooxidants and related controversy: Natural and synthetic compounds, screening and analysis methodologies and future perspectives
- (2012) Márcio Carocho et al. FOOD AND CHEMICAL TOXICOLOGY
- Characterization of interleukin-1 receptor-associated kinase 1 binding protein 1 gene in small abalone Haliotis diversicolor
- (2012) Hui Ge et al. GENE
- Bactericidal/permeability increasing protein: A multifaceted protein with functions beyond LPS neutralization
- (2012) Arjun Balakrishnan et al. Innate Immunity
- Identification of Genes Potentially Related to Biomineralization and Immunity by Transcriptome Analysis of Pearl Sac in Pearl Oyster Pinctada martensii
- (2012) Xiaoxia Zhao et al. MARINE BIOTECHNOLOGY
- The oyster genome reveals stress adaptation and complexity of shell formation
- (2012) Guofan Zhang et al. NATURE
- Massively Parallel RNA Sequencing Identifies a Complex Immune Gene Repertoire in the lophotrochozoan Mytilus edulis
- (2012) Eva E. R. Philipp et al. PLoS One
- Oxidative Stress and Antioxidant Defense
- (2012) Esra Birben et al. World Allergy Organization Journal
- The Cell Biology of Phagocytosis
- (2011) Ronald S. Flannagan et al. Annual Review of Pathology-Mechanisms of Disease
- The first identification of molluscan Ecsit in the Pacific oyster, Crassostrea gigas, and its expression against bacterial challenge
- (2011) Linlin Zhang et al. AQUACULTURE RESEARCH
- Antioxidant deficit in gills of Pacific oyster (Crassostrea gigas) exposed to chlorodinitrobenzene increases menadione toxicity
- (2011) Rafael Trevisan et al. AQUATIC TOXICOLOGY
- Cysteine cathepsins: From structure, function and regulation to new frontiers
- (2011) Vito Turk et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Oyster Reefs at Risk and Recommendations for Conservation, Restoration, and Management
- (2011) Michael W. Beck et al. BIOSCIENCE
- Characterization of the Conus bullatus genome and its venom-duct transcriptome
- (2011) Hao Hu et al. BMC GENOMICS
- Insights into the innate immunity of the Mediterranean mussel Mytilus galloprovincialis
- (2011) Paola Venier et al. BMC GENOMICS
- Comparative and phylogenetic analyses of three TIR domain-containing adaptors in metazoans: Implications for evolution of TLR signaling pathways
- (2011) Baojun Wu et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Immune parameters of QX-resistant and wild caught Saccostrea glomerata hemocytes in relation to Marteilia sydneyi infection
- (2011) Cécile Dang et al. FISH & SHELLFISH IMMUNOLOGY
- Immunological function in marine invertebrates: Responses to environmental perturbation
- (2011) R.P. Ellis et al. FISH & SHELLFISH IMMUNOLOGY
- The impact of next-generation sequencing on genomics
- (2011) Jun Zhang et al. Journal of Genetics and Genomics
- Toll-like receptor activation and hypoxia use distinct signaling pathways to stabilize hypoxia-inducible factor 1α (HIF1A) and result in differential HIF1A-dependent gene expression
- (2011) Jonathan Jantsch et al. JOURNAL OF LEUKOCYTE BIOLOGY
- Transcriptomic Analysis of the Clam Meretrix meretrix on Different Larval Stages
- (2011) Pin Huan et al. MARINE BIOTECHNOLOGY
- Role of Hypoxia-Inducible Factor α in Response to Hypoxia and Heat Shock in the Pacific Oyster Crassostrea gigas
- (2011) Shinya Kawabe et al. MARINE BIOTECHNOLOGY
- Crosstalk in NF-κB signaling pathways
- (2011) Andrea Oeckinghaus et al. NATURE IMMUNOLOGY
- Big Defensins, a Diverse Family of Antimicrobial Peptides That Follows Different Patterns of Expression in Hemocytes of the Oyster Crassostrea gigas
- (2011) Rafael D. Rosa et al. PLoS One
- Apoptosis and its functional significance in molluscs
- (2010) Tibor Kiss APOPTOSIS
- High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus
- (2010) Raul Bettencourt et al. BMC GENOMICS
- Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization
- (2010) Caroline Joubert et al. BMC GENOMICS
- Molecular characterization and mRNA expression of two key enzymes of hypoxia-sensing pathways in eastern oysters Crassostrea virginica (Gmelin): Hypoxia-inducible factor α (HIF-α) and HIF-prolyl hydroxylase (PHD)
- (2010) Helen Piontkivska et al. Comparative Biochemistry and Physiology D-Genomics & Proteomics
- A novel scavenger receptor-cysteine-rich (SRCR) domain containing scavenger receptor identified from mollusk mediated PAMP recognition and binding
- (2010) Lin Liu et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Immunosuppressive effects of environmental stressors on immunological function in Pinctada imbricata
- (2010) Rhiannon P. Kuchel et al. FISH & SHELLFISH IMMUNOLOGY
- Apoptosis as a host defense mechanism in Crassostrea virginica and its modulation by Perkinsus marinus
- (2010) Francis M. Hughes et al. FISH & SHELLFISH IMMUNOLOGY
- Emerging Roles of FAM14 Family Members (G1P3/ISG 6–16 and ISG12/IFI27) in Innate Immunity and Cancer
- (2010) Venugopalan Cheriyath et al. JOURNAL OF INTERFERON AND CYTOKINE RESEARCH
- Molecular Characterization of a Novel Big Defensin from Clam Venerupis philippinarum
- (2010) Jianmin Zhao et al. PLoS One
- IRAK1BP1 inhibits inflammation by promoting nuclear translocation of NF- B p50
- (2010) J. R. Conner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Detection and description of a particular Ostreid herpesvirus 1 genotype associated with massive mortality outbreaks of Pacific oysters, Crassostrea gigas, in France in 2008
- (2010) Amélie Segarra et al. VIRUS RESEARCH
- MytiBase: a knowledgebase of mussel (M. galloprovincialis) transcribed sequences
- (2009) Paola Venier et al. BMC GENOMICS
- Differential expression of genes encoding anti-oxidant enzymes in Sydney rock oysters, Saccostrea glomerata (Gould) selected for disease resistance
- (2009) Timothy J. Green et al. FISH & SHELLFISH IMMUNOLOGY
- Hypoxic stress up-regulates the expression of Toll-like receptor 4 in macrophages via hypoxia-inducible factor
- (2009) So Young Kim et al. IMMUNOLOGY
- Reduced salinity, but not estuarine acidification, is a cause of immune-suppression in the Sydney rock oyster Saccostrea glomerata
- (2009) TJ Green et al. MARINE ECOLOGY PROGRESS SERIES
- Association study between the -62A/T NFKBIL1 polymorphism and obsessive-compulsive disorder
- (2009) Quirino Cordeiro et al. REVISTA BRASILEIRA DE PSIQUIATRIA
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Cathepsins: Key modulators of cell death and inflammatory responses
- (2008) Sébastien Conus et al. BIOCHEMICAL PHARMACOLOGY
- Cloning and mRNA expression of antioxidant enzymes in the Pacific oyster, Crassostrea gigas in response to cadmium exposure
- (2008) Pil Gue Jo et al. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY
- Chromatin profiling across the human tumour necrosis factor gene locus reveals a complex, cell type-specific landscape with novel regulatory elements
- (2008) Jennifer M. Taylor et al. NUCLEIC ACIDS RESEARCH
- Regulation of innate immunity by suppressor of cytokine signaling (SOCS) proteins
- (2007) Alexander Dalpke et al. IMMUNOBIOLOGY
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