Genome-Wide Analysis of Wild-Type Epstein–Barr Virus Genomes Derived from Healthy Individuals of the 1000 Genomes Project

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

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An Atlas of the Epstein-Barr Virus Transcriptome and Epigenome Reveals Host-Virus Regulatory Interactions

(2012) Aaron Arvey et al.   Cell Host & Microbe

Whole-Genome Sequencing of the Akata and Mutu Epstein-Barr Virus Strains

(2012) Z. Lin et al.   JOURNAL OF VIROLOGY

Genomic Sequencing and Comparative Analysis of Epstein-Barr Virus Genome Isolated from Primary Nasopharyngeal Carcinoma Biopsy

(2012) Hin Kwok et al.   PLoS One

Epstein-Barr virus latent gene sequences as geographical markers of viral origin: unique EBNA3 gene signatures identify Japanese viruses as distinct members of the Asian virus family

(2011) A. Sawada et al.   JOURNAL OF GENERAL VIROLOGY

Direct Sequencing and Characterization of a Clinical Isolate of Epstein-Barr Virus from Nasopharyngeal Carcinoma Tissue by Using Next-Generation Sequencing Technology

(2011) P. Liu et al.   JOURNAL OF VIROLOGY

Identification of New Viral Genes and Transcript Isoforms during Epstein-Barr Virus Reactivation using RNA-Seq

(2011) M. Concha et al.   JOURNAL OF VIROLOGY

High frequency of co-infection by Epstein–Barr virus types 1 and 2 in patients with multiple sclerosis

(2011) Almudena Santón et al.   Multiple Sclerosis Journal

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Fusing structure and function: a structural view of the herpesvirus entry machinery

(2011) Sarah A. Connolly et al.   NATURE REVIEWS MICROBIOLOGY

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Widespread sequence variation in the Epstein-Barr virus latent membrane protein 2A gene among northern Chinese isolates

(2010) X. Wang et al.   JOURNAL OF GENERAL VIROLOGY

EBNA1 sequences in Argentinean pediatric acute and latent Epstein-Barr virus infection reflect circulation of novel South American variants

(2010) Mario Alejandro Lorenzetti et al.   JOURNAL OF MEDICAL VIROLOGY

Epstein–Barr Virus Infection and Multiple Sclerosis: A Review

(2010) Alberto Ascherio et al.   Journal of Neuroimmune Pharmacology

Strains of Epstein-Barr virus infecting multiple sclerosis patients

(2010) RM Brennan et al.   Multiple Sclerosis Journal

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

(2009) Daniel C. Koboldt et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Epstein-Barr virus BART gene expression

(2009) M. Al-Mozaini et al.   JOURNAL OF GENERAL VIROLOGY

Reliabilities of identifying positive selection by the branch-site and the site-prediction methods

(2009) M. Nozawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The extent of genetic diversity of Epstein-Barr virus and its geographic and disease patterns: A need for reappraisal

(2009) Cindy M. Chang et al.   VIRUS RESEARCH

Variations of Epstein-Barr virus nuclear antigen 1 gene in gastric carcinomas and nasopharyngeal carcinomas from Northern China

(2009) Yun Wang et al.   VIRUS RESEARCH

A Genealogical Interpretation of Principal Components Analysis

(2009) Gil McVean   PLoS Genetics

Molecular Basis of the Interaction between Complement Receptor Type 2 (CR2/CD21) and Epstein-Barr Virus Glycoprotein gp350

(2008) K. A. Young et al.   JOURNAL OF VIROLOGY

Epstein-Barr Virus LF2: an Antagonist to Type I Interferon

(2008) L. Wu et al.   JOURNAL OF VIROLOGY

Patterns of Positive Selection in Six Mammalian Genomes

(2008) Carolin Kosiol et al.   PLoS Genetics