Intron Evolution in Saccharomycetaceae

The Third Exon of the Budding Yeast Meiotic Recombination GeneHOP2Is Required for Calcium-dependent and Recombinase Dmc1-specific Stimulation of Homologous Strand Assimilation

(2014) Yuen-Ling Chan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

nhmmer: DNA homology search with profile HMMs

(2013) T. J. Wheeler et al.   BIOINFORMATICS

Comparative genomics of emerging pathogens in the Candida glabrata clade

(2013) Toni Gabaldón et al.   BMC GENOMICS

Microhomology-Mediated Intron Loss during Metazoan Evolution

(2013) Robin van Schendel et al.   Genome Biology and Evolution

Computational identification of functional introns: high positional conservation of introns that harbor RNA genes

(2013) Michal Chorev et al.   NUCLEIC ACIDS RESEARCH

Origin and evolution of spliceosomal introns

(2012) Igor B Rogozin et al.   Biology Direct

Diverse Forms of RPS9 Splicing Are Part of an Evolving Autoregulatory Circuit

(2012) Alex M. Plocik et al.   PLoS Genetics

Introns within Ribosomal Protein Genes Regulate the Production and Function of Yeast Ribosomes

(2011) Julie Parenteau et al.   CELL

The intronome of budding yeasts

(2011) Cécile Neuvéglise et al.   COMPTES RENDUS BIOLOGIES

Evidence for Extensive Recent Intron Transposition in Closely Related Fungi

(2011) Stefano F.F. Torriani et al.   CURRENT BIOLOGY

Mechanisms of Chromosome Number Evolution in Yeast

(2011) Jonathan L. Gordon et al.   PLoS Genetics

Filtering error from SOLiD Output

(2010) Ariella Sasson et al.   BIOINFORMATICS

U12 type introns were lost at multiple occasions during evolution

(2010) Sebastian Bartschat et al.   BMC GENOMICS

Evolution of Yeast Noncoding RNAs Reveals an Alternative Mechanism for Widespread Intron Loss

(2010) Q. M. Mitrovich et al.   SCIENCE

DNA double-strand break repair and the evolution of intron density

(2010) Ashley Farlow et al.   TRENDS IN GENETICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Comparative genomics of protoploid Saccharomycetaceae

(2009) et al.   GENOME RESEARCH

An Overview of the Introns-First Theory

(2009) David Penny et al.   JOURNAL OF MOLECULAR EVOLUTION

Ubiquitous internal gene duplication and intron creation in eukaryotes

(2009) X. Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing

(2009) M. Yassour et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extensive, Recent Intron Gains in Daphnia Populations

(2009) W. Li et al.   SCIENCE

Additions, Losses, and Rearrangements on the Evolutionary Route from a Reconstructed Ancestor to the Modern Saccharomyces cerevisiae Genome

(2009) Jonathan L. Gordon et al.   PLoS Genetics

Evolutionary Convergence on Highly-Conserved 3′ Intron Structures in Intron-Poor Eukaryotes and Insights into the Ancestral Eukaryotic Genome

(2008) Manuel Irimia et al.   PLoS Genetics