The Spatiotemporal Program of Replication in the Genome of Lachancea kluyveri

Conservation of replication timing reveals global and local regulation of replication origin activity

(2012) C. A. Muller et al.   GENOME RESEARCH

Maintaining replication origins in the face of genomic change

(2012) S. C. Di Rienzi et al.   GENOME RESEARCH

Asymmetry Indices for Analysis and Prediction of Replication Origins in Eukaryotic Genomes

(2012) Marie-Claude Marsolier-Kergoat   PLoS One

Novel features of ARS selection in budding yeast Lachancea kluyveri

(2011) Ivan Liachko et al.   BMC GENOMICS

Mutation Rates across Budding Yeast Chromosome VI Are Correlated with Replication Timing

(2011) Gregory I. Lang et al.   Genome Biology and Evolution

Replication-Associated Mutational Asymmetry in the Human Genome

(2011) Chun-Long Chen et al.   MOLECULAR BIOLOGY AND EVOLUTION

DNA Replication Induces Compositional Biases in Yeast

(2011) M.-C. Marsolier-Kergoat et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Mutational Profile of the Yeast Genome Is Shaped by Replication

(2011) N. Agier et al.   MOLECULAR BIOLOGY AND EVOLUTION

OriDB, the DNA replication origin database updated and extended

(2011) C. C. Siow et al.   NUCLEIC ACIDS RESEARCH

Genome-wide estimation of firing efficiencies of origins of DNA replication from time-course copy number variation data

(2010) Huaien Luo et al.   BMC BIOINFORMATICS

Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes

(2010) C. L. Chen et al.   GENOME RESEARCH

Modeling genome-wide replication kinetics reveals a mechanism for regulation of replication timing

(2010) Scott Cheng-Hsin Yang et al.   Molecular Systems Biology

GINS motion reveals replication fork progression is remarkably uniform throughout the yeast genome

(2010) Matthew D Sekedat et al.   Molecular Systems Biology

Mathematical modelling of whole chromosome replication

(2010) Alessandro P. S. de Moura et al.   NUCLEIC ACIDS RESEARCH

The Role of Nucleosome Positioning in the Evolution of Gene Regulation

(2010) Alexander M. Tsankov et al.   PLOS BIOLOGY

The Baker's Yeast Diploid Genome Is Remarkably Stable in Vegetative Growth and Meiosis

(2010) K. T. Nishant et al.   PLoS Genetics

A Comprehensive Genome-Wide Map of Autonomously Replicating Sequences in a Naive Genome

(2010) Ivan Liachko et al.   PLoS Genetics

Epigenetically-Inherited Centromere and Neocentromere DNA Replicates Earliest in S-Phase

(2010) Amnon Koren et al.   PLoS Genetics

Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes

(2009) Laurent Duret et al.   Annual Review of Genomics and Human Genetics

Defining replication origin efficiency using DNA fiber assays

(2009) Sandie Tuduri et al.   CHROMOSOME RESEARCH

GC Content and Recombination: Reassessing the Causal Effects for the Saccharomyces cerevisiae Genome

(2009) M.-C. Marsolier-Kergoat et al.   GENETICS

Fragile Genomic Sites Are Associated with Origins of Replication

(2009) Sara C. Di Rienzi et al.   Genome Biology and Evolution

Unusual composition of a yeast chromosome arm is associated with its delayed replication

(2009) C. Payen et al.   GENOME RESEARCH

Comparative genomics of protoploid Saccharomycetaceae

(2009) et al.   GENOME RESEARCH

Human mutation rate associated with DNA replication timing

(2009) John A Stamatoyannopoulos et al.   NATURE GENETICS

Additions, Losses, and Rearrangements on the Evolutionary Route from a Reconstructed Ancestor to the Modern Saccharomyces cerevisiae Genome

(2009) Jonathan L. Gordon et al.   PLoS Genetics

GIMSAN: a Gibbs motif finder with significance analysis

(2008) P. Ng et al.   BIOINFORMATICS

Estimating the Per-Base-Pair Mutation Rate in the Yeast Saccharomyces cerevisiae

(2008) Gregory I. Lang et al.   GENETICS

The Temporal Program of Chromosome Replication: Genomewide Replication in clb5  Saccharomyces cerevisiae

(2008) H. J. McCune et al.   GENETICS

Transcription induces strand-specific mutations at the 5' end of human genes

(2008) P. Polak et al.   GENOME RESEARCH

Transcription-Induced Mutational Strand Bias and Its Effect on Substitution Rates in Human Genes

(2008) C. F. Mugal et al.   MOLECULAR BIOLOGY AND EVOLUTION

High-resolution mapping of meiotic crossovers and non-crossovers in yeast

(2008) Eugenio Mancera et al.   NATURE

Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle

(2008) I. J. Tsai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A genome-wide view of the spectrum of spontaneous mutations in yeast

(2008) M. Lynch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA Combing Reveals Intrinsic Temporal Disorder in the Replication of Yeast Chromosome VI

(2007) Daniel M. Czajkowsky et al.   JOURNAL OF MOLECULAR BIOLOGY