Reconstructing the Phylogenetic History of Long-Term Effective Population Size and Life-History Traits Using Patterns of Amino Acid Replacement in Mitochondrial Genomes of Mammals and Birds

Interaction between Selection and Biased Gene Conversion in Mammalian Protein-Coding Sequence Evolution Revealed by a Phylogenetic Covariance Analysis

(2012) N. Lartillot   MOLECULAR BIOLOGY AND EVOLUTION

Genomic Evidence for Large, Long-Lived Ancestors to Placental Mammals

(2012) J. Romiguier et al.   MOLECULAR BIOLOGY AND EVOLUTION

Adaptive radiation of multituberculate mammals before the extinction of dinosaurs

(2012) Gregory P. Wilson et al.   NATURE

JOINT RECONSTRUCTION OF DIVERGENCE TIMES AND LIFE-HISTORY EVOLUTION IN PLACENTAL MAMMALS USING A PHYLOGENETIC COVARIANCE MODEL

(2011) Nicolas Lartillot et al.   EVOLUTION

Evolution of Modern Birds Revealed by Mitogenomics: Timing the Radiation and Origin of Major Orders

(2011) M. A. Pacheco et al.   MOLECULAR BIOLOGY AND EVOLUTION

Multiple routes to mammalian diversity

(2011) Chris Venditti et al.   NATURE

A Molecular Phylogeny of Living Primates

(2011) Polina Perelman et al.   PLoS Genetics

Apparent longevity-related adaptation of mitochondrial amino acid content is due to nucleotide compositional shifts

(2010) Richard W. Jobson et al.   MITOCHONDRION

Domestication Relaxed Selective Constraints on the Yak Mitochondrial Genome

(2010) Zhaofeng Wang et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Phylogenetic Model for Investigating Correlated Evolution of Substitution Rates and Continuous Phenotypic Characters

(2010) N. Lartillot et al.   MOLECULAR BIOLOGY AND EVOLUTION

Obtaining mtDNA genomes from next-generation transcriptome sequencing: A case study on the basal Passerida (Aves: Passeriformes) phylogeny

(2010) Benoit Nabholz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Watching the clock: Studying variation in rates of molecular evolution between species

(2010) Robert Lanfear et al.   TRENDS IN ECOLOGY & EVOLUTION

Molecular evolution of genes in avian genomes

(2010) Kiwoong Nam et al.   GENOME BIOLOGY

Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes

(2009) Laurent Duret et al.   Annual Review of Genomics and Human Genetics

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades

(2009) Shani Blanga-Kanfi et al.   BMC EVOLUTIONARY BIOLOGY

The erratic mitochondrial clock: variations of mutation rate, not population size, affect mtDNA diversity across birds and mammals

(2009) Benoit Nabholz et al.   BMC EVOLUTIONARY BIOLOGY

PanTHERIA: a species-level database of life history, ecology, and geography of extant and recently extinct mammals

(2009) Kate E. Jones et al.   ECOLOGY

SLOWER TEMPO OF MICROEVOLUTION IN ISLAND BIRDS: IMPLICATIONS FOR CONSERVATION BIOLOGY

(2009) Shane D. Wright et al.   EVOLUTION

A database of vertebrate longevity records and their relation to other life-history traits

(2009) J. P. DE MAGALHÃES et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Mitochondrial DNA as a marker of molecular diversity: a reappraisal

(2009) N. GALTIER et al.   MOLECULAR ECOLOGY

Patterns of macroevolution among Primates inferred from a supermatrix of mitochondrial and nuclear DNA

(2009) P-.H. Fabre et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Effective population size and patterns of molecular evolution and variation

(2009) Brian Charlesworth   NATURE REVIEWS GENETICS

Evidence for Variation in the Effective Population Size of Animal Mitochondrial DNA

(2009) Gwenael Piganeau et al.   PLoS One

Hotspots of Biased Nucleotide Substitutions in Human Genes

(2009) Jonas Berglund et al.   PLOS BIOLOGY

Determination of Mitochondrial Genetic Diversity in Mammals

(2008) Benoit Nabholz et al.   GENETICS

Avian mtDNA diversity?: An alternate explanation for low mtDNA diversity in birds: an age-old solution?

(2008) A J R Hickey   HEREDITY

Body size evolution in Mesozoic birds

(2008) D. W. E. HONE et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Toward Resolving Deep Neoaves Phylogeny: Data, Signal Enhancement, and Priors

(2008) R. C. Pratt et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Phylogenomic Study of Birds Reveals Their Evolutionary History

(2008) S. J. Hackett et al.   SCIENCE

GC-biased gene conversion promotes the fixation of deleterious amino acid changes in primates

(2008) Nicolas Galtier et al.   TRENDS IN GENETICS