Genome-Wide Survey on Genomic Variation, Expression Divergence, and Evolution in Two Contrasting Rice Genotypes under High Salinity Stress

Genetic variation and expression diversity between grain and sweet sorghum lines

(2013) Shu-Ye Jiang et al.   BMC GENOMICS

Comparative Genomic and Transcriptomic Analysis of Tandemly and Segmentally Duplicated Genes in Rice

(2013) Shu-Ye Jiang et al.   PLoS One

Identification of the dehydrin gene family from grapevine species and analysis of their responsiveness to various forms of abiotic and biotic stress

(2012) Yazhou Yang et al.   BMC PLANT BIOLOGY

A map of rice genome variation reveals the origin of cultivated rice

(2012) Xuehui Huang et al.   NATURE

A Comparison of Brain Gene Expression Levels in Domesticated and Wild Animals

(2012) Frank W. Albert et al.   PLoS Genetics

NAC transcription factors in plant abiotic stress responses

(2011) Kazuo Nakashima et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

(2011) Xun Xu et al.   NATURE BIOTECHNOLOGY

Coping with Stresses: Roles of Calcium- and Calcium/Calmodulin-Regulated Gene Expression

(2011) Anireddy S.N. Reddy et al.   PLANT CELL

Population Structure and Genetic Diversity in a Rice Core Collection (Oryza sativa L.) Investigated with SSR Markers

(2011) Peng Zhang et al.   PLoS One

Evolutionary origin of a novel gene expression pattern through co-option of the latent activities of existing regulatory sequences

(2011) M. Rebeiz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assigning biological functions to rice genes by genome annotation, expression analysis and mutagenesis

(2010) Shu-Ye Jiang et al.   BIOTECHNOLOGY LETTERS

Root-Specific Transcript Profiling of Contrasting Rice Genotypes in Response to Salinity Stress

(2010) Olivier Cotsaftis et al.   Molecular Plant

Chromatin regulators as capacitors of interspecies variations in gene expression

(2010) Itay Tirosh et al.   Molecular Systems Biology

Genetic Variation in Biomass Traits among 20 Diverse Rice Varieties

(2010) C. E. Jahn et al.   PLANT PHYSIOLOGY

Overexpression of the soybean GmERF3 gene, an AP2/ERF type transcription factor for increased tolerances to salt, drought, and diseases in transgenic tobacco

(2009) G. Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

PlnTFDB: updated content and new features of the plant transcription factor database

(2009) Paulino Pérez-Rodríguez et al.   NUCLEIC ACIDS RESEARCH

Genomewide SNP variation reveals relationships among landraces and modern varieties of rice

(2009) K. L. McNally et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation

(2009) I. Tirosh et al.   SCIENCE

HKT transporter-mediated salinity resistance mechanisms in Arabidopsis and monocot crop plants

(2009) Tomoaki Horie et al.   TRENDS IN PLANT SCIENCE

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

A comparative computational analysis of nonautonomous Helitron elements between maize and rice

(2008) Michael Sweredoski et al.   BMC GENOMICS

A Genome-Wide Transcription Analysis Reveals a Close Correlation of Promoter INDEL Polymorphism and Heterotic Gene Expression in Rice Hybrids

(2008) Hui-Yong Zhang et al.   Molecular Plant

A Comprehensive Transcriptional Profiling of the WRKY Gene Family in Rice Under Various Abiotic and Phytohormone Treatments

(2008) Rengasamy Ramamoorthy et al.   PLANT AND CELL PHYSIOLOGY

GRASSIUS: A Platform for Comparative Regulatory Genomics across the Grasses

(2008) A. Yilmaz et al.   PLANT PHYSIOLOGY