The Oxytricha trifallax Mitochondrial Genome

The mitochondrial genome sequence of the ciliate Paramecium caudatum reveals a shift in nucleotide composition and codon usage within the genus Paramecium

(2011) Dana Barth et al.   BMC GENOMICS

The Organellar Genome and Metabolic Potential of the Hydrogen-Producing Mitochondrion of Nyctotherus ovalis

(2011) Rob M. de Graaf et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ongoing and future developments at the Universal Protein Resource

(2010)   NUCLEIC ACIDS RESEARCH

Infernal 1.0: inference of RNA alignments

(2009) E. P. Nawrocki et al.   BIOINFORMATICS

The mitochondrial genomes of the ciliates Euplotes minuta and Euplotes crassus

(2009) Rob M de Graaf et al.   BMC GENOMICS

Molecular Evolution of the mtDNA Encoded rps3 Gene Among Filamentous Ascomycetes Fungi with an Emphasis on the Ophiostomatoid Fungi

(2009) Jyothi Sethuraman et al.   JOURNAL OF MOLECULAR EVOLUTION

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Fast and accurate automatic structure prediction with HHpred

(2009) Andrea Hildebrand et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

A Functional Role for Transposases in a Large Eukaryotic Genome

(2009) M. Nowacki et al.   SCIENCE

Macronuclear genome structure of the ciliate Nyctotherus ovalis: Single-gene chromosomes and tiny introns

(2008) Guénola Ricard et al.   BMC GENOMICS

Purification and characterization of organellar DNA polymerases in the red alga Cyanidioschyzon merolae

(2008) Takashi Moriyama et al.   FEBS Journal

The mitochondrial genome of Hydra oligactis (Cnidaria, Hydrozoa) sheds new light on animal mtDNA evolution and cnidarian phylogeny

(2008) Ehsan Kayal et al.   GENE

Linear plasmids in plant mitochondria: Peaceful coexistences or malicious invasions?

(2007) Hirokazu Handa   MITOCHONDRION