Environmental monitoring using next generation sequencing: rapid identification of macroinvertebrate bioindicator species

Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing

(2012) DONALD J. BAIRD et al.   MOLECULAR ECOLOGY

Next-generation sequencing technologies for environmental DNA research

(2012) SHADI SHOKRALLA et al.   MOLECULAR ECOLOGY

Universal primers for fluorescent labelling of PCR fragments-an efficient and cost-effective approach to genotyping by fluorescence

(2012) M. J. BLACKET et al.   Molecular Ecology Resources

A combination of molecular and morphological approaches resolves species in the taxonomically difficult genus Procladius Skuse (Diptera: Chironomidae) despite high intra-specific morphological variation

(2011) M.E. Carew et al.   BULLETIN OF ENTOMOLOGICAL RESEARCH

Phylogenetic signals and ecotoxicological responses: potential implications for aquatic biomonitoring

(2011) Melissa E. Carew et al.   ECOTOXICOLOGY

Systematics and biogeography of the Gondwanan Orthocladiinae (Diptera: Chironomidae)

(2011) M.N. Krosch et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

(2011) Mehrdad Hajibabaei et al.   PLoS One

Isolating the impact of sediment toxicity in urban streams

(2010) Stephen Marshall et al.   ENVIRONMENTAL POLLUTION

Ecometagenetics confirm high tropical rainforest nematode diversity

(2010) DOROTA L. PORAZINSKA et al.   MOLECULAR ECOLOGY

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

Assessing Macroinvertebrate Biodiversity in Freshwater Ecosystems: Advances and Challenges in DNA-based Approaches

(2010) Michael E. Pfrender et al.   QUARTERLY REVIEW OF BIOLOGY

Integrated taxonomy: traditional approach and DNA barcoding for the identification of filarioid worms and related parasites (Nematoda)

(2009) Emanuele Ferri et al.   Frontiers in Zoology

Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity

(2009) DOROTA L. PORAZINSKA et al.   Molecular Ecology Resources

DNA barcoding should accompany taxonomy - the case ofCerebratulusspp (Nemertea)

(2009) P. SUNDBERG et al.   Molecular Ecology Resources

Discrimination of Cricotopus species (Diptera: Chironomidae) by DNA barcoding

(2008) C.S. Sinclair et al.   BULLETIN OF ENTOMOLOGICAL RESEARCH

Effects of sediment quality on macroinvertebrates in the Sunraysia region of the Murray–Darling Rivers, Australia

(2008) David J. Sharley et al.   ENVIRONMENTAL POLLUTION

HIGH MOLECULAR WEIGHT PETROLEUM HYDROCARBONS DIFFERENTIALLY AFFECT FRESHWATER BENTHIC MACROINVERTEBRATE ASSEMBLAGES

(2008) Jennifer R. Anson et al.   ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY

Parallel tagged sequencing on the 454 platform

(2008) Matthias Meyer et al.   Nature Protocols