Microbial community assembly differs across minerals in a rhizosphere microcosm
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Microbial community assembly differs across minerals in a rhizosphere microcosm
Authors
Keywords
-
Journal
ENVIRONMENTAL MICROBIOLOGY
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2018-07-26
DOI
10.1111/1462-2920.14366
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Impact of root diversity upon coupling between soil C and N accumulation and bacterial community dynamics and activity: Result of a 30 year rotation experiment
- (2017) Ying Wang et al. GEODERMA
- Stochastic Community Assembly: Does It Matter in Microbial Ecology?
- (2017) Jizhong Zhou et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- An Endohyphal Bacterium (Chitinophaga, Bacteroidetes) Alters Carbon Source Use by Fusarium keratoplasticum (F. solani Species Complex, Nectriaceae)
- (2017) Justin P. Shaffer et al. Frontiers in Microbiology
- Mineral Types and Tree Species Determine the Functional and Taxonomic Structures of Forest Soil Bacterial Communities
- (2016) Y. Colin et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Conservation of the Essential Genome Among Caulobacter and Brevundimonas Species
- (2016) Derrick Scott et al. CURRENT MICROBIOLOGY
- FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
- (2016) Nhu H. Nguyen et al. Fungal Ecology
- Mineral Type Structures Soil Microbial Communities
- (2016) Engy Ahmed et al. GEOMICROBIOLOGY JOURNAL
- Direct evidence for microbial-derived soil organic matter formation and its ecophysiological controls
- (2016) Cynthia M. Kallenbach et al. Nature Communications
- The Ecology of Acidobacteria: Moving beyond Genes and Genomes
- (2016) Anna M. Kielak et al. Frontiers in Microbiology
- Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis
- (2015) Liyou Wu et al. BMC MICROBIOLOGY
- Decreases in average bacterial community rRNA operon copy number during succession
- (2015) Diana R Nemergut et al. ISME Journal
- A continental view of pine-associated ectomycorrhizal fungal spore banks: a quiescent functional guild with a strong biogeographic pattern
- (2015) Sydney I. Glassman et al. NEW PHYTOLOGIST
- Microbial hotspots and hot moments in soil: Concept & review
- (2015) Yakov Kuzyakov et al. SOIL BIOLOGY & BIOCHEMISTRY
- The Mineralosphere Concept: Mineralogical Control of the Distribution and Function of Mineral-associated Bacterial Communities
- (2015) Stephane Uroz et al. TRENDS IN MICROBIOLOGY
- Successional Trajectories of Rhizosphere Bacterial Communities over Consecutive Seasons
- (2015) Shengjing Shi et al. mBio
- Microbial mineral colonization across a subsurface redox transition zone
- (2015) Brandon J. Converse et al. Frontiers in Microbiology
- Estimating and mapping ecological processes influencing microbial community assembly
- (2015) James C. Stegen et al. Frontiers in Microbiology
- Microbial degradation of organic carbon sorbed to phyllosilicate clays with and without hydrous iron oxide coating
- (2014) A. R. Saidy et al. EUROPEAN JOURNAL OF SOIL SCIENCE
- rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
- (2014) Steven F. Stoddard et al. NUCLEIC ACIDS RESEARCH
- Spatial Ecology of Bacteria at the Microscale in Soil
- (2014) Xavier Raynaud et al. PLoS One
- Stochasticity, succession, and environmental perturbations in a fluidic ecosystem
- (2014) Jizhong Zhou et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- An Illumina metabarcoding pipeline for fungi
- (2014) Miklós Bálint et al. Ecology and Evolution
- PEAR: a fast and accurate Illumina Paired-End reAd mergeR
- (2013) J. Zhang et al. BIOINFORMATICS
- Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm
- (2013) Andrea K. Bartram et al. FEMS MICROBIOLOGY ECOLOGY
- Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses
- (2013) Steven J Blazewicz et al. ISME Journal
- Quantifying community assembly processes and identifying features that impose them
- (2013) James C Stegen et al. ISME Journal
- Towards a unified paradigm for sequence-based identification of fungi
- (2013) Urmas Kõljalg et al. MOLECULAR ECOLOGY
- UPARSE: highly accurate OTU sequences from microbial amplicon reads
- (2013) Robert C Edgar NATURE METHODS
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- Aggregate-associated soil organic matter as an ecosystem property and a measurement tool
- (2013) Johan Six et al. SOIL BIOLOGY & BIOCHEMISTRY
- Correlation of the Abundance of Betaproteobacteria on Mineral Surfaces with Mineral Weathering in Forest Soils
- (2012) C. Lepleux et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Bacterial Associations with Weathering Minerals at the Regolith-Bedrock Interface, Luquillo Experimental Forest, Puerto Rico
- (2012) Morgan L. Minyard et al. GEOMICROBIOLOGY JOURNAL
- The Microbial Efficiency-Matrix Stabilization (MEMS) framework integrates plant litter decomposition with soil organic matter stabilization: do labile plant inputs form stable soil organic matter?
- (2012) M. Francesca Cotrufo et al. GLOBAL CHANGE BIOLOGY
- Long-term effect of apatite on ectomycorrhizal growth and community structure
- (2012) Christoffer Berner et al. MYCORRHIZA
- Initial Ecosystem Processes as Key Factors of Landscape Development—A Review
- (2012) Thomas Raab et al. PHYSICAL GEOGRAPHY
- SOM genesis: microbial biomass as a significant source
- (2011) Anja Miltner et al. BIOGEOCHEMISTRY
- Minerals Affect the Specific Diversity of Forest Soil Bacterial Communities
- (2011) S. Uroz et al. GEOMICROBIOLOGY JOURNAL
- Persistence of soil organic matter as an ecosystem property
- (2011) Michael W. I. Schmidt et al. NATURE
- Using null models to disentangle variation in community dissimilarity from variation in α-diversity
- (2011) Jonathan M. Chase et al. Ecosphere
- Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance
- (2011) Katherine C. Goldfarb et al. Frontiers in Microbiology
- Picante: R tools for integrating phylogenies and ecology
- (2010) S. W. Kembel et al. BIOINFORMATICS
- Meter-Scale Diversity of Microbial Communities on a Weathered Pegmatite Granite Outcrop in the Wicklow Mountains, Ireland; Evidence for Mineral Induced Selection?
- (2010) Elena Hutchens et al. GEOMICROBIOLOGY JOURNAL
- Soil bacterial and fungal communities across a pH gradient in an arable soil
- (2010) Johannes Rousk et al. ISME Journal
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Hydration-controlled bacterial motility and dispersal on surfaces
- (2010) A. Dechesne et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale
- (2009) C. L. Lauber et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Minerals in soil select distinct bacterial communities in their microhabitats
- (2009) Jennifer K. Carson et al. FEMS MICROBIOLOGY ECOLOGY
- Metals, minerals and microbes: geomicrobiology and bioremediation
- (2009) G. M. Gadd MICROBIOLOGY-SGM
- Mineral weathering by bacteria: ecology, actors and mechanisms
- (2009) Stéphane Uroz et al. TRENDS IN MICROBIOLOGY
- Microbial selectivity on mineral surfaces: possible implications for weathering processes
- (2009) Elena Hutchens Fungal Biology Reviews
- Bacterial quorum sensing and nitrogen cycling in rhizosphere soil
- (2008) Kristen M. DeAngelis et al. FEMS MICROBIOLOGY ECOLOGY
- Clay minerals: Precise markers of the spatial and temporal variability of the biogeochemical soil environment
- (2008) M.-P. Turpault et al. GEODERMA
- Selective progressive response of soil microbial community to wild oat roots
- (2008) Kristen M DeAngelis et al. ISME Journal
- Organo-mineral associations in temperate soils: Integrating biology, mineralogy, and organic matter chemistry
- (2008) Ingrid Kögel-Knabner et al. JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE
- Does the preferential microbial colonisation of ferromagnesian minerals affect mineral weathering in soil?
- (2008) Michael J. Wilson et al. NATURWISSENSCHAFTEN
- rrnDB: documenting the number of rRNA and tRNA genes in bacteria and archaea
- (2008) Z. M.-P. Lee et al. NUCLEIC ACIDS RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More