Metagenomic characterization of ‘Candidatus Defluviicoccus tetraformis strain TFO71’, a tetrad-forming organism, predominant in an anaerobic-aerobic membrane bioreactor with deteriorated biological phosphorus removal

ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies

(2013) Scott C. Clark et al.   BIOINFORMATICS

Metabolic model for the filamentous ‘Candidatus Microthrix parvicella’ based on genomic and metagenomic analyses

(2013) Simon Jon McIlroy et al.   ISME Journal

Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal

(2013) Jason J Flowers et al.   ISME Journal

A New Family of Intrinsically Disordered Proteins: Structural Characterization of the Major Phasin PhaF from Pseudomonas putida KT2440

(2013) Beatriz Maestro et al.   PLoS One

Taxonomic binning of metagenome samples generated by next-generation sequencing technologies

(2012) J. Droge et al.   BRIEFINGS IN BIOINFORMATICS

Deciphering the Genome of Polyphosphate Accumulating Actinobacterium Microlunatus phosphovorus

(2012) A. Kawakoshi et al.   DNA RESEARCH

A metabolic model for members of the genus Tetrasphaera involved in enhanced biological phosphorus removal

(2012) Rikke Kristiansen et al.   ISME Journal

Population dynamics of bacteria involved in enhanced biological phosphorus removal in Danish wastewater treatment plants

(2012) Artur Tomasz Mielczarek et al.   WATER RESEARCH

Quake: quality-aware detection and correction of sequencing errors

(2012) David R Kelley et al.   GENOME BIOLOGY

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

(2011) Chris L Dupont et al.   ISME Journal

IMG/M: the integrated metagenome data management and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Microbiology of ‘Candidatus Accumulibacter’ in activated sludge

(2011) Shaomei He et al.   Microbial Biotechnology

Deciphering the physiological blueprint of a bacterial cell

(2010) Alejandro Toledo-Arana et al.   BIOESSAYS

Filamentous members of cluster III Defluviicoccus have the in situ phenotype expected of a glycogen-accumulating organism in activated sludge

(2010) Simon J. McIlroy et al.   FEMS MICROBIOLOGY ECOLOGY

‘Candidatus Accumulibacter’ gene expression in response to dynamic EBPR conditions

(2010) Shaomei He et al.   ISME Journal

A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria

(2010) S. Lucker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Candidatus Monilibacter spp., common bulking filaments in activated sludge, are members of Cluster III Defluviicoccus

(2009) Tadashi Nittami et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Elucidating further phylogenetic diversity among theDefluviicoccus-related glycogen-accumulating organisms in activated sludge

(2009) Simon McIlroy et al.   Environmental Microbiology Reports

Characterisation of polyhydroxyalkanoate copolymers with controllable four-monomer composition

(2008) Yu Dai et al.   JOURNAL OF BIOTECHNOLOGY

The denitrification capability of cluster 1Defluviicoccus vanus-related glycogen-accumulating organisms

(2007) Xiaolian Wang et al.   BIOTECHNOLOGY AND BIOENGINEERING