Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal

Comparative genomics reveals evidence of marine adaptation in Salinispora species

(2012) Kevin Penn et al.   BMC GENOMICS

Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system

(2012) Joe Bondy-Denomy et al.   NATURE

Metabolic shift of polyphosphate-accumulating organisms with different levels of polyphosphate storage

(2012) B. Acevedo et al.   WATER RESEARCH

Genome Sequences of Alicycliphilus denitrificans Strains BC and K601T

(2011) M. J. Oosterkamp et al.   JOURNAL OF BACTERIOLOGY

Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System

(2011) Connor T. Skennerton et al.   PLoS One

Microbial Metagenomics: Beyond the Genome

(2010) Jack A. Gilbert et al.   Annual Review of Marine Science

Bacterial Community and "Candidatus Accumulibacter" Population Dynamics in Laboratory-Scale Enhanced Biological Phosphorus Removal Reactors

(2010) S. He et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metatranscriptomic array analysis of ‘Candidatus Accumulibacter phosphatis’-enriched enhanced biological phosphorus removal sludge

(2010) Shaomei He et al.   ENVIRONMENTAL MICROBIOLOGY

‘Candidatus Accumulibacter’ gene expression in response to dynamic EBPR conditions

(2010) Shaomei He et al.   ISME Journal

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea

(2010) Luciano A. Marraffini et al.   NATURE REVIEWS GENETICS

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Incorporating microbial ecology into the metabolic modelling of polyphosphate accumulating organisms and glycogen accumulating organisms

(2010) A. Oehmen et al.   WATER RESEARCH

Assessing the abundance and activity of denitrifying polyphosphate accumulating organisms through molecular and chemical techniques

(2010) Adrian Oehmen et al.   WATER SCIENCE AND TECHNOLOGY

Radiolabelled proteomics to determine differential functioning ofAccumulibacterduring the anaerobic and aerobic phases of a bioreactor operating for enhanced biological phosphorus removal

(2009) Margaret Wexler et al.   ENVIRONMENTAL MICROBIOLOGY

Biogeography of the Sulfolobus islandicus pan-genome

(2009) M. L. Reno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Failure of an enriched nitrite-DPAO population to use nitrate as an electron acceptor

(2009) Albert Guisasola et al.   PROCESS BIOCHEMISTRY

Denitrification capabilities of two biological phosphorus removal sludges dominated by different ‘CandidatusAccumulibacter’ clades

(2009) Jason J. Flowers et al.   Environmental Microbiology Reports

Isolation and Characterization of Alicycliphilus denitrificans Strain BC, Which Grows on Benzene with Chlorate as the Electron Acceptor

(2008) S. A. B. Weelink et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Environmental distribution and population biology of Candidatus Accumulibacter, a primary agent of biological phosphorus removal

(2008) S. Brook Peterson et al.   ENVIRONMENTAL MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Anaerobic glyoxylate cycle activity during simultaneous utilization of glycogen and acetate in uncultured Accumulibacter enriched in enhanced biological phosphorus removal communities

(2008) Luke C Burow et al.   ISME Journal

Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal

(2008) Paul Wilmes et al.   ISME Journal

A bacterial metapopulation adapts locally to phage predation despite global dispersal

(2007) V. Kunin et al.   GENOME RESEARCH