Translation elongation can control translation initiation on eukaryotic mRNAs

Cotranslational Response to Proteotoxic Stress by Elongation Pausing of Ribosomes

(2013) Botao Liu et al.   MOLECULAR CELL

Widespread Regulation of Translation by Elongation Pausing in Heat Shock

(2013) Reut Shalgi et al.   MOLECULAR CELL

An in vivo control map for the eukaryotic mRNA translation machinery

(2013) H. Firczuk et al.   Molecular Systems Biology

Non-optimal codon usage affects expression, structure and function of clock protein FRQ

(2013) Mian Zhou et al.   NATURE

Positively Charged Residues Are the Major Determinants of Ribosomal Velocity

(2013) Catherine A. Charneski et al.   PLOS BIOLOGY

Ribosome Traffic on mRNAs Maps to Gene Ontology: Genome-wide Quantification of Translation Initiation Rates and Polysome Size Regulation

(2013) Luca Ciandrini et al.   PLoS Computational Biology

A yeast tRNA mutant that causes pseudohyphal growth exhibits reduced rates of CAG codon translation

(2012) Alain J. Kemp et al.   MOLECULAR MICROBIOLOGY

A mechanistic overview of translation initiation in eukaryotes

(2012) Colin Echeverría Aitken et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The architecture of eukaryotic translation

(2012) Dominique Chu et al.   NUCLEIC ACIDS RESEARCH

Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins

(2012) Clement T.Y. Chan et al.   Nature Communications

Determinants of Translation Elongation Speed and Ribosomal Profiling Biases in Mouse Embryonic Stem Cells

(2012) Alexandra Dana et al.   PLoS Computational Biology

Balanced Codon Usage Optimizes Eukaryotic Translational Efficiency

(2012) Wenfeng Qian et al.   PLoS Genetics

A novel and versatile computational tool to model translation

(2011) D. Chu et al.   BIOINFORMATICS

Xylitol production is increased by expression of codon-optimized Neurospora crassa xylose reductase gene in Candida tropicalis

(2011) Woo Young Jeon et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes

(2011) Nicholas T. Ingolia et al.   CELL

The role of tRNA and ribosome competition in coupling the expression of different mRNAs in Saccharomyces cerevisiae

(2011) Dominique Chu et al.   NUCLEIC ACIDS RESEARCH

Wobble base-pairing slows in vivo translation elongation in metazoans

(2011) M. Stadler et al.   RNA

Secretory expression and purification of a soluble NADH cytochrome b5 reductase enzyme from Mucor racemosus in Pichia pastoris based on codon usage adaptation

(2010) S. A. Mirzaei et al.   BIOTECHNOLOGY LETTERS

Decoding accuracy in eRF1 mutants and its correlation with pleiotropic quantitative traits in yeast

(2010) G. H. Merritt et al.   NUCLEIC ACIDS RESEARCH

PhosphoGRID: a database of experimentally verified in vivo protein phosphorylation sites from the budding yeast Saccharomyces cerevisiae

(2010) C. Stark et al.   Database-The Journal of Biological Databases and Curation

Pichia pastoris as a host for secretion of toxic saporin chimeras

(2009) Alessio Lombardi et al.   FASEB JOURNAL

Experimentally Increased Codon Bias in the Drosophila Adh Gene Leads to an Increase in Larval, But Not Adult, Alcohol Dehydrogenase Activity

(2009) W. Hense et al.   GENETICS

Population genomics of domestic and wild yeasts

(2009) Gianni Liti et al.   NATURE

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

Coding-Sequence Determinants of Gene Expression in Escherichia coli

(2009) G. Kudla et al.   SCIENCE

Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

(2009) N. T. Ingolia et al.   SCIENCE

Selection on Codon Bias

(2008) Ruth Hershberg et al.   Annual Review of Genetics

Effects of Codon Distributions and tRNA Competition on Protein Translation

(2008) Hermioni Zouridis et al.   BIOPHYSICAL JOURNAL

A quantitative estimation of the global translational activity in logarithmically growing yeast cells

(2008) Tobias von der Haar   BMC Systems Biology