Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

Epigenetic modifications in plants: an evolutionary perspective

(2011) Suhua Feng et al.   CURRENT OPINION IN PLANT BIOLOGY

Polycomb Repressive Complex 2 Controls the Embryo-to-Seedling Phase Transition

(2011) Daniel Bouyer et al.   PLoS Genetics

The Language of Histone Crosstalk

(2010) Jung-Shin Lee et al.   CELL

Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells

(2010) Guillaume J. Filion et al.   CELL

Regulation of cell identity by plant Polycomb and trithorax group proteins

(2010) Claudia Köhler et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin

(2010) N. C. Riddle et al.   GENOME RESEARCH

A unique H3K4me2 profile marks tissue-specific gene regulation

(2010) A. Pekowska et al.   GENOME RESEARCH

Broad chromosomal domains of histone modification patterns in C. elegans

(2010) T. Liu et al.   GENOME RESEARCH

Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases

(2010) Yannick Jacob et al.   NATURE

Relationship between nucleosome positioning and DNA methylation

(2010) Ramakrishna K. Chodavarapu et al.   NATURE

Discovery and characterization of chromatin states for systematic annotation of the human genome

(2010) Jason Ernst et al.   NATURE BIOTECHNOLOGY

Charting histone modifications and the functional organization of mammalian genomes

(2010) Vicky W. Zhou et al.   NATURE REVIEWS GENETICS

Arabidopsis SET DOMAIN GROUP2Is Required for H3K4 Trimethylation and Is Crucial for Both Sporophyte and Gametophyte Development

(2010) Alexandre Berr et al.   PLANT CELL

ANCORP: a high-resolution approach that generates distinct chromatin state models from multiple genome-wide datasets

(2010) Chongyuan Luo et al.   PLANT JOURNAL

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

(2010) et al.   SCIENCE

Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project

(2010) M. B. Gerstein et al.   SCIENCE

Regulation of Alternative Splicing by Histone Modifications

(2010) R. F. Luco et al.   SCIENCE

Arabidopsis thaliana Chromosome 4 Replicates in Two Phases That Correlate with Chromatin State

(2010) Tae-Jin Lee et al.   PLoS Genetics

Genome-Wide Views of Chromatin Structure

(2009) Oliver J. Rando et al.   Annual Review of Biochemistry

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS

Characterization of human epigenomes

(2009) Zhibin Wang et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Linking Cell Cycle to Histone Modifications: SBF and H2B Monoubiquitination Machinery and Cell-Cycle Regulation of H3K79 Dimethylation

(2009) Julia M. Schulze et al.   MOLECULAR CELL

Differential chromatin marking of introns and expressed exons by H3K36me3

(2009) Paulina Kolasinska-Zwierz et al.   NATURE GENETICS

ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing

(2009) Yannick Jacob et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Dynamic Landscapes of Four Histone Modifications during Deetiolation in Arabidopsis

(2009) J.-B. F. Charron et al.   PLANT CELL

Chromatin indexing in Arabidopsis: an epigenomic tale of tails and more

(2009) François Roudier et al.   TRENDS IN GENETICS

Discovery and Annotation of Functional Chromatin Signatures in the Human Genome

(2009) Gary Hon et al.   PLoS Computational Biology

Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

(2009) Xiaoyu Zhang et al.   GENOME BIOLOGY

ChIPmix: mixture model of regressions for two-color ChIP-chip analysis

(2008) M.-L. Martin-Magniette et al.   BIOINFORMATICS

Crosstalk among Histone Modifications

(2008) Tamaki Suganuma et al.   CELL

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

(2008) Ryan Lister et al.   CELL

Histone Ubiquitination: Triggering Gene Activity

(2008) Vikki M. Weake et al.   MOLECULAR CELL

Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks

(2008) Daniel Zilberman et al.   NATURE

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE

Monoubiquitinated H2B is associated with the transcribed region of highly expressed genes in human cells

(2008) Neri Minsky et al.   NATURE CELL BIOLOGY

Combinatorial patterns of histone acetylations and methylations in the human genome

(2008) Zhibin Wang et al.   NATURE GENETICS

Is there a code embedded in proteins that is based on post-translational modifications?

(2008) Robert J. Sims et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Histone H2B Monoubiquitination in the Chromatin of FLOWERING LOCUS C Regulates Flowering Time in Arabidopsis

(2008) Y. Cao et al.   PLANT CELL

Repression of the floral transition via histone H2B monoubiquitination

(2008) Xiaofeng Gu et al.   PLANT JOURNAL

Histone H2B Deubiquitination Is Required for Transcriptional Activation of FLOWERING LOCUS C and for Proper Control of Flowering in Arabidopsis

(2008) R. J. Schmitz et al.   PLANT PHYSIOLOGY

Genome-Wide Association of Histone H3 Lysine Nine Methylation with CHG DNA Methylation in Arabidopsis thaliana

(2008) Yana V. Bernatavichute et al.   PLoS One

Repression of FLOWERING LOCUS C and FLOWERING LOCUS T by the Arabidopsis Polycomb Repressive Complex 2 Components

(2008) Danhua Jiang et al.   PLoS One

Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation

(2008) Stephanie K. Williams et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epigenomic Consequences of Immortalized Plant Cell Suspension Culture

(2008) Milos Tanurdzic et al.   PLOS BIOLOGY

Genic and Global Functions for Paf1C in Chromatin Modification and Gene Expression in Arabidopsis

(2008) Sookyung Oh et al.   PLoS Genetics