Determinism of bacterial metacommunity dynamics in the southern East China Sea varies depending on hydrography

Beta diversity of marine bacteria depends on temporal scale

(2013) Stephen M. Hatosy et al.   ECOLOGY

Both species sorting and neutral processes drive assembly of bacterial communities in aquatic microcosms

(2013) Jack E. Lee et al.   FEMS MICROBIOLOGY ECOLOGY

Effects of environmental variation and spatial distance on Bacteria, Archaea and viruses in sub-polar and arctic waters

(2013) Christian Winter et al.   ISME Journal

Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight

(2013) Cheryl-Emiliane T Chow et al.   ISME Journal

Disentangling the drivers of metacommunity structure across spatial scales

(2013) Christine N. Meynard et al.   JOURNAL OF BIOGEOGRAPHY

Evidence for a persistent microbial seed bank throughout the global ocean

(2013) S. M. Gibbons et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Advection shapes Southern Ocean microbial assemblages independent of distance and environment effects

(2013) David Wilkins et al.   Nature Communications

Lineage-Specific Responses of Microbial Communities to Environmental Change

(2012) Nicholas D. Youngblut et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A community of metacommunities: exploring patterns in species distributions across large geographical areas

(2012) Renato Henriques-Silva et al.   ECOLOGY

Body size and dispersal mode as key traits determining metacommunity structure of aquatic organisms

(2012) T. Bie et al.   ECOLOGY LETTERS

Does phylogeny matter? Assessing the impact of phylogenetic information in ecological meta-analysis

(2012) Scott A. Chamberlain et al.   ECOLOGY LETTERS

Dispersal-mediated trophic interactions can generate apparent patterns of dispersal limitation in aquatic metacommunities

(2012) Dino Verreydt et al.   ECOLOGY LETTERS

Tracking differential incorporation of dissolved organic carbon types among diverse lineages of Sargasso Sea bacterioplankton

(2012) Craig E. Nelson et al.   ENVIRONMENTAL MICROBIOLOGY

Lineage-dependent ecological coherence in bacteria

(2012) Alexander F. Koeppel et al.   FEMS MICROBIOLOGY ECOLOGY

Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat

(2012) J Kirk Harris et al.   ISME Journal

The terminology of metacommunity ecology

(2012) Amanda K. Winegardner et al.   TRENDS IN ECOLOGY & EVOLUTION

Differing Growth Responses of Major Phylogenetic Groups of Marine Bacteria to Natural Phytoplankton Blooms in the Western North Pacific Ocean

(2011) Yuya Tada et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Species sorting and neutral processes are both important during the initial assembly of bacterial communities

(2011) Silke Langenheder et al.   ISME Journal

Temporal variation of β-diversity and assembly mechanisms in a bacterial metacommunity

(2011) Silke Langenheder et al.   ISME Journal

Defining seasonal marine microbial community dynamics

(2011) Jack A Gilbert et al.   ISME Journal

Coherent dynamics and association networks among lake bacterioplankton taxa

(2011) Alexander Eiler et al.   ISME Journal

Drivers of bacterial  -diversity depend on spatial scale

(2011) J. B. H. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Empirical approaches to metacommunities: a review and comparison with theory

(2011) Jürg B. Logue et al.   TRENDS IN ECOLOGY & EVOLUTION

Local and regional factors influencing bacterial community assembly

(2011) Eva S. Lindström et al.   Environmental Microbiology Reports

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Species dispersal rates alter diversity and ecosystem stability in pond metacommunities

(2010) Jennifer G. Howeth et al.   ECOLOGY

Local factors control the community composition of cyanobacteria in lakes while heterotrophic bacteria follow a neutral model

(2010) STINA DRAKARE et al.   FRESHWATER BIOLOGY

Species sorting affects bacterioplankton community composition as determined by 16S rDNA and 16S rRNA fingerprints

(2010) Jürg B Logue et al.   ISME Journal

Water mass-specificity of bacterial communities in the North Atlantic revealed by massively parallel sequencing

(2010) HÉLÈNE AGOGUÉ et al.   MOLECULAR ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

A comprehensive framework for the evaluation of metacommunity structure

(2010) Steven J. Presley et al.   OIKOS

Combined niche and neutral effects in a microbial wastewater treatment community

(2010) I. D. Ofiteru et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biogeographic Patterns in Genomic Diversity among a Large Collection of Vibrio cholerae Isolates

(2009) D. P. Keymer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Global phylogenetic community structure and β-diversity patterns in surface bacterioplankton metacommunities

(2009) A Barberán et al.   AQUATIC MICROBIAL ECOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Hydrography shapes bacterial biogeography of the deep Arctic Ocean

(2009) Pierre E Galand et al.   ISME Journal

Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities

(2009) Anders F Andersson et al.   ISME Journal

Quantifying and disentangling dispersal in metacommunities: how close have we come? How far is there to go?

(2009) Bailey Jacobson et al.   LANDSCAPE ECOLOGY

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

(2008) Micah Hamady et al.   NATURE METHODS