Conflict in outcomes for conservation based on population genetic diversity and genetic divergence approaches: a case study in the Japanese relictual conifer Sciadopitys verticillata (Sciadopityaceae)

Outlier Loci and Selection Signatures of Simple Sequence Repeats (SSRs) in Flax (Linum usitatissimum L.)

(2013) Braulio J. Soto-Cerda et al.   PLANT MOLECULAR BIOLOGY REPORTER

Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree

(2013) Hannah McPherson et al.   BMC ECOLOGY

Northern richness and southern poverty: contrasting genetic footprints of glacial refugia in the relictual treeSciadopitys verticillata(Coniferales: Sciadopityaceae)

(2012) James R. P. Worth et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

A simulation study on the performance of differentiation-based methods to detect selected loci using linked neutral markers

(2012) A. VILAS et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Multiple evolutionary processes drive the patterns of genetic differentiation in a forest tree species complex

(2012) Rebecca C. Jones et al.   Ecology and Evolution

Microsatellite evidence for high clonality and limited genetic diversity in Ziziphus celata (Rhamnaceae), an endangered, self-incompatible shrub endemic to the Lake Wales Ridge, Florida, USA

(2011) Matthew A. Gitzendanner et al.   CONSERVATION GENETICS

Comparison ofFSToutlier tests for SNP loci under selection

(2011) SHAWN R. NARUM et al.   Molecular Ecology Resources

Cenozoic extinctions account for the low diversity of extant gymnosperms compared with angiosperms

(2011) Michael D. Crisp et al.   NEW PHYTOLOGIST

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

A new method for the partition of allelic diversity within and between subpopulations

(2010) Armando Caballero et al.   CONSERVATION GENETICS

Building evolutionary resilience for conserving biodiversity under climate change

(2010) Carla M. Sgrò et al.   Evolutionary Applications

Genetic Structure of an Endemic Japanese Conifer, Sciadopitys verticillata (Sciadopityaceae), by Using Microsatellite Markers

(2010) D. Kawase et al.   JOURNAL OF HEREDITY

Genetic diversity and structure of natural fragmented Chamaecyparis obtusa populations as revealed by microsatellite markers

(2010) Asako Matsumoto et al.   JOURNAL OF PLANT RESEARCH

Landscape genomics and biased FST approaches reveal single nucleotide polymorphisms under selection in goat breeds of North-East Mediterranean

(2009) Lorraine Pariset et al.   BMC GENETICS

Development and characterization of EST-SSR markers for Sciadopitys verticillata (Sciadopityaceae)

(2009) Daiju Kawase et al.   CONSERVATION GENETICS

Linkage disequilibrium estimates of contemporaryNeusing highly variable genetic markers: a largely untapped resource for applied conservation and evolution

(2009) Robin S. Waples et al.   Evolutionary Applications

Detecting loci under selection in a hierarchically structured population

(2009) L Excoffier et al.   HEREDITY

Population Genetic Structure of Fagus japonica Revealed by Nuclear Microsatellite Markers

(2009) Koichi Hiraoka et al.   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Genetic divergence in nuclear genomes between populations of Fagus crenata along the Japan Sea and Pacific sides of Japan

(2009) Koichi Hiraoka et al.   JOURNAL OF PLANT RESEARCH

Inferring weak population structure with the assistance of sample group information

(2009) MELISSA J. HUBISZ et al.   Molecular Ecology Resources

A new proposal concerning the botanical origin of Baltic amber

(2009) A. P. Wolfe et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

ADZE: a rarefaction approach for counting alleles private to combinations of populations

(2008) Z. A. Szpiech et al.   BIOINFORMATICS

LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method

(2008) Tiago Antao et al.   BMC BIOINFORMATICS

METAPOP—A software for the management and analysis of subdivided populations in conservation programs

(2008) A. Pérez-Figueroa et al.   CONSERVATION GENETICS

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations?

(2008) ÜLO VÄLI et al.   MOLECULAR ECOLOGY

GSTand its relatives do not measure differentiation

(2008) LOU JOST   MOLECULAR ECOLOGY

Genetic variation across species’ geographical ranges: the central–marginal hypothesis and beyond

(2008) C. G. ECKERT et al.   MOLECULAR ECOLOGY

ldne: a program for estimating effective population size from data on linkage disequilibrium

(2008) ROBIN S. WAPLES et al.   Molecular Ecology Resources

COMPUTER PROGRAMS: onesamp: a program to estimate effective population size using approximate Bayesian computation

(2007) DAVID A. TALLMON et al.   Molecular Ecology Resources