Using quantitative PCR with retrotransposon-based insertion polymorphisms as markers in sugarcane

Building the sugarcane genome for biotechnology and identifying evolutionary trends

(2014) Nathalia de Setta et al.   BMC GENOMICS

A comprehensive genetic map of sugarcane that provides enhanced map coverage and integrates high-throughput Diversity Array Technology (DArT) markers

(2014) Karen S Aitken et al.   BMC GENOMICS

Comparative mapping in the Poaceae family reveals translocations in the complex polyploid genome of sugarcane

(2014) Karen S Aitken et al.   BMC PLANT BIOLOGY

Comparative Analysis of Miscanthus and Saccharum Reveals a Shared Whole-Genome Duplication but Different Evolutionary Fates

(2014) C. Kim et al.   PLANT CELL

Sugarcane genome sequencing by methylation filtration provides tools for genomic research in the genusSaccharum

(2014) Clícia Grativol et al.   PLANT JOURNAL

De Novo Assembly and Transcriptome Analysis of Contrasting Sugarcane Varieties

(2014) Claudio Benicio Cardoso-Silva et al.   PLoS One

Full-Length Enriched cDNA Libraries and ORFeome Analysis of Sugarcane Hybrid and Ancestor Genotypes

(2014) Milton Yutaka Nishiyama et al.   PLoS One

A Survey Sequence Comparison of Saccharum Genotypes Reveals Allelic Diversity Differences

(2014) Paul J. Berkman et al.   Tropical Plant Biology

From sugar industry to cane industry: Evaluation and simultaneous selection of different types of high biomass canes

(2013) D. Santchurn et al.   BIOMASS & BIOENERGY

Independent target region amplification polymorphism and single-nucleotide polymorphism marker utility in genetic evaluation of sugarcane genotypes

(2013) Rachayya M. Devarumath et al.   PLANT BREEDING

SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids

(2013) Antonio A. F. Garcia et al.   Scientific Reports

The potential of C4 grasses for cellulosic biofuel production

(2013) Tim van der Weijde et al.   Frontiers in Plant Science

Functional Evolution in the Plant SQUAMOSA-PROMOTER BINDING PROTEIN-LIKE (SPL) Gene Family

(2013) Jill C. Preston et al.   Frontiers in Plant Science

Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns

(2012) Douglas S Domingues et al.   BMC GENOMICS

PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees

(2012) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

Developing sugarcane lignocellulosic biorefineries: opportunities and challenges

(2012) Barrie Fong Chong et al.   Biofuels-UK

Sugarcane improvement: how far can we go?

(2011) Maximiller Dal-Bianco et al.   CURRENT OPINION IN BIOTECHNOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Next-Generation Biofuels: Survey of Emerging Technologies and Sustainability Issues

(2010) Sergey Zinoviev et al.   ChemSusChem

Molecular cytogenetic investigation of chromosome composition and transmission in sugarcane

(2010) George Piperidis et al.   MOLECULAR GENETICS AND GENOMICS

Sugarcane for bioenergy production: an assessment of yield and regulation of sucrose content

(2010) Alessandro J. Waclawovsky et al.   PLANT BIOTECHNOLOGY JOURNAL

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

The Biotechnology Roadmap for Sugarcane Improvement

(2010) Carlos T. Hotta et al.   Tropical Plant Biology

An overview of second generation biofuel technologies

(2009) Ralph E.H. Sims et al.   BIORESOURCE TECHNOLOGY

Informative genomic microsatellite markers for efficient genotyping applications in sugarcane

(2008) Swarup K. Parida et al.   THEORETICAL AND APPLIED GENETICS