Data integration in the era of omics: current and future challenges

‘Big data’, Hadoop and cloud computing in genomics

(2013) Aisling O’Driscoll et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Integrated genomic characterization of endometrial carcinoma

(2013) Gad Getz et al.   NATURE

Synthetic non-oxidative glycolysis enables complete carbon conservation

(2013) Igor W. Bogorad et al.   NATURE

Identification of transcriptional regulators in the mouse immune system

(2013) Vladimir Jojic et al.   NATURE IMMUNOLOGY

Immunological Genome Project and systems immunology

(2013) Tal Shay et al.   TRENDS IN IMMUNOLOGY

GENCODE: The reference human genome annotation for The ENCODE Project

(2012) J. Harrow et al.   GENOME RESEARCH

ENCODE explained

(2012) Joseph R. Ecker et al.   NATURE

A map of the cis-regulatory sequences in the mouse genome

(2012) Yin Shen et al.   NATURE

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Unsupervised pattern discovery in human chromatin structure through genomic segmentation

(2012) Michael M Hoffman et al.   NATURE METHODS

MicroRNA profiling: approaches and considerations

(2012) Colin C. Pritchard et al.   NATURE REVIEWS GENETICS

Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing

(2012) Marco Gerlinger et al.   NEW ENGLAND JOURNAL OF MEDICINE

Hive plots--rational approach to visualizing networks

(2011) M. Krzywinski et al.   BRIEFINGS IN BIOINFORMATICS

Interactome Networks and Human Disease

(2011) Marc Vidal et al.   CELL

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

GREAT improves functional interpretation of cis-regulatory regions

(2010) Cory Y McLean et al.   NATURE BIOTECHNOLOGY

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line

(2009) Harukazu Suzuki et al.   NATURE GENETICS

Data and knowledge integration in the life sciences

(2008) S. Philippi   BRIEFINGS IN BIOINFORMATICS

State of the nation in data integration for bioinformatics

(2008) Carole Goble et al.   JOURNAL OF BIOMEDICAL INFORMATICS