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Title
MicroRNA profiling: approaches and considerations
Authors
Keywords
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Journal
NATURE REVIEWS GENETICS
Volume 13, Issue 5, Pages 358-369
Publisher
Springer Nature
Online
2012-04-18
DOI
10.1038/nrg3198
References
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Note: Only part of the references are listed.- Direct microRNA detection with universal tagged probe and time-resolved fluorescence technology
- (2012) Li Jiang et al. BIOSENSORS & BIOELECTRONICS
- Differential expression patterns of conserved miRNAs and isomiRs during Atlantic halibut development
- (2012) Teshome T Bizuayehu et al. BMC GENOMICS
- Detection of small RNA molecules by a combination of branched rolling circle amplification and bioluminescent pyrophosphate assay
- (2011) Yasumasa Mashimo et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- An enzyme-linked assay for the rapid quantification of microRNAs based on the viral suppressor of RNA silencing protein p19
- (2011) Neda Nasheri et al. ANALYTICAL BIOCHEMISTRY
- MicroRNA Profiling by Simultaneous Selective Isotachophoresis and Hybridization with Molecular Beacons
- (2011) Alexandre Persat et al. ANALYTICAL CHEMISTRY
- Anti-DNA:RNA Antibodies and Silicon Photonic Microring Resonators: Increased Sensitivity for Multiplexed microRNA Detection
- (2011) Abraham J. Qavi et al. ANALYTICAL CHEMISTRY
- Amplified Detection of MicroRNA Based on Ruthenium Oxide Nanoparticle-Initiated Deposition of an Insulating Film
- (2011) Yanfen Peng et al. ANALYTICAL CHEMISTRY
- Ultrasensitive Multiplexed MicroRNA Quantification on Encoded Gel Microparticles Using Rolling Circle Amplification
- (2011) Stephen C. Chapin et al. ANALYTICAL CHEMISTRY
- Evaluation of two commercial global miRNA expression profiling platforms for detection of less abundant miRNAs
- (2011) Steffen G Jensen et al. BMC GENOMICS
- Blood Cell Origin of Circulating MicroRNAs: A Cautionary Note for Cancer Biomarker Studies
- (2011) C. C. Pritchard et al. Cancer Prevention Research
- Prospective Gene Signature Study Using microRNA to Identify the Tissue of Origin in Patients with Carcinoma of Unknown Primary
- (2011) G. R. Varadhachary et al. CLINICAL CANCER RESEARCH
- Do Platform-Specific Factors Explain MicroRNA Profiling Disparities?
- (2011) A. K. Watson et al. CLINICAL CHEMISTRY
- Analysis of Circulating MicroRNA: Preanalytical and Analytical Challenges
- (2011) J. S. McDonald et al. CLINICAL CHEMISTRY
- Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity
- (2011) S. K. Wyman et al. GENOME RESEARCH
- Specific Micro-RNA Signatures for the Detection of Saliva and Blood in Forensic Body-fluid Identification
- (2011) Cornelius Courts et al. JOURNAL OF FORENSIC SCIENCES
- Plasma Components Affect Accuracy of Circulating Cancer-Related MicroRNA Quantitation
- (2011) Dong-Ja Kim et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- MicroRNA profiling for the identification of cancers with unknown primary tissue-of-origin
- (2011) Manuela Ferracin et al. JOURNAL OF PATHOLOGY
- Computational methods for transcriptome annotation and quantification using RNA-seq
- (2011) Manuel Garber et al. NATURE METHODS
- mirConnX: condition-specific mRNA-microRNA network integrator
- (2011) G. T. Huang et al. NUCLEIC ACIDS RESEARCH
- Experimental strategies for microRNA target identification
- (2011) D. W. Thomson et al. NUCLEIC ACIDS RESEARCH
- Impact of Cellular miRNAs on Circulating miRNA Biomarker Signatures
- (2011) Radha Duttagupta et al. PLoS One
- MicroRNA Expression Aberration as Potential Peripheral Blood Biomarkers for Schizophrenia
- (2011) Chi-Yu Lai et al. PLoS One
- MicroRNA signatures in tissues and plasma predict development and prognosis of computed tomography detected lung cancer
- (2011) Mattia Boeri et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma
- (2011) J. D. Arroyo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Deep sequencing of microRNA precursors reveals extensive 3' end modification
- (2011) M. A. Newman et al. RNA
- RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries
- (2011) M. Hafner et al. RNA
- Quantitative Prediction of miRNA-mRNA Interaction Based on Equilibrium Concentrations
- (2011) Chikako Ragan et al. PLoS Computational Biology
- MicroRNAs and their isomiRs function cooperatively to target common biological pathways
- (2011) Nicole Cloonan et al. GENOME BIOLOGY
- Direct Quantification of Single-Molecules of MicroRNA by Total Internal Reflection Fluorescence Microscopy
- (2010) Ho-Man Chan et al. ANALYTICAL CHEMISTRY
- Quantification of Global MicroRNA Abundance by Selective Isotachophoresis
- (2010) Alexandre Persat et al. ANALYTICAL CHEMISTRY
- Surface Plasmon Resonance Biosensor for Rapid Label-Free Detection of Microribonucleic Acid at Subfemtomole Level
- (2010) Hana Šípová et al. ANALYTICAL CHEMISTRY
- Cytoscape Web: an interactive web-based network browser
- (2010) Christian T. Lopes et al. BIOINFORMATICS
- Concordance among digital gene expression, microarrays, and qPCR when measuring differential expression of microRNAs
- (2010) Sylvain Pradervand et al. BIOTECHNIQUES
- Normalization strategies for microRNA profiling experiments: a ‘normal’ way to a hidden layer of complexity?
- (2010) Swanhild U. Meyer et al. BIOTECHNOLOGY LETTERS
- Sequencing bias: comparison of different protocols of MicroRNA library construction
- (2010) Geng Tian et al. BMC BIOTECHNOLOGY
- Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
- (2010) Markus Hafner et al. CELL
- Chromosomal and MicroRNA Expression Patterns Reveal Biologically Distinct Subgroups of 11q- Neuroblastoma
- (2010) P. G. Buckley et al. CLINICAL CANCER RESEARCH
- The MicroRNA Spectrum in 12 Body Fluids
- (2010) J. A. Weber et al. CLINICAL CHEMISTRY
- Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
- (2010) H. R. Chiang et al. GENES & DEVELOPMENT
- A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness
- (2010) A. M. Burroughs et al. GENOME RESEARCH
- MicroRNA markers for forensic body fluid identification obtained from microarray screening and quantitative RT-PCR confirmation
- (2010) Dmitry Zubakov et al. INTERNATIONAL JOURNAL OF LEGAL MEDICINE
- Expression profiling of microRNA using real-time quantitative PCR, how to use it and what is available
- (2010) Vladimir Benes et al. METHODS
- mRNA and microRNA quality control for RT-qPCR analysis
- (2010) C. Becker et al. METHODS
- Analysis of circulating microRNA biomarkers in plasma and serum using quantitative reverse transcription-PCR (qRT-PCR)
- (2010) Evan M. Kroh et al. METHODS
- New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism
- (2010) Philipp Kapranov et al. NATURE
- Data handling errors spur debate over clinical trial
- (2010) Stu Hutson NATURE MEDICINE
- Expander: from expression microarrays to networks and functions
- (2010) Igor Ulitsky et al. Nature Protocols
- Tackling the widespread and critical impact of batch effects in high-throughput data
- (2010) Jeffrey T. Leek et al. NATURE REVIEWS GENETICS
- Desperately seeking microRNA targets
- (2010) Marshall Thomas et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A dumbbell probe-mediated rolling circle amplification strategy for highly sensitive microRNA detection
- (2010) Yuntao Zhou et al. NUCLEIC ACIDS RESEARCH
- miRBase: integrating microRNA annotation and deep-sequencing data
- (2010) A. Kozomara et al. NUCLEIC ACIDS RESEARCH
- MAGIA, a web-based tool for miRNA and Genes Integrated Analysis
- (2010) G. Sales et al. NUCLEIC ACIDS RESEARCH
- Characterization of the Melanoma miRNAome by Deep Sequencing
- (2010) Mitchell S. Stark et al. PLoS One
- Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression
- (2010) A. Git et al. RNA
- A modified LOESS normalization applied to microRNA arrays: a comparative evaluation
- (2009) Davide Risso et al. BIOINFORMATICS
- Validation of extraction methods for total RNA and miRNA from bovine blood prior to quantitative gene expression analyses
- (2009) Andrea Hammerle-Fickinger et al. BIOTECHNOLOGY LETTERS
- RNA degradation compromises the reliability of microRNA expression profiling
- (2009) David Ibberson et al. BMC BIOTECHNOLOGY
- Reproducibility of quantitative RT-PCR array in miRNA expression profiling and comparison with microarray analysis
- (2009) Yongxin Chen et al. BMC GENOMICS
- MicroRNAs and the kidney: coming of age
- (2009) Samuel Saal et al. CURRENT OPINION IN NEPHROLOGY AND HYPERTENSION
- Selective stabilization of mammalian microRNAs by 3' adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2
- (2009) T. Katoh et al. GENES & DEVELOPMENT
- Zcchc11-dependent uridylation of microRNA directs cytokine expression
- (2009) Matthew R. Jones et al. NATURE CELL BIOLOGY
- Limitations and possibilities of small RNA digital gene expression profiling
- (2009) Sam E V Linsen et al. NATURE METHODS
- Sequencing technologies — the next generation
- (2009) Michael L. Metzker NATURE REVIEWS GENETICS
- MicroRNA Expression, Survival, and Response to Interferon in Liver Cancer
- (2009) Junfang Ji et al. NEW ENGLAND JOURNAL OF MEDICINE
- Impact of normalization on miRNA microarray expression profiling
- (2009) S. Pradervand et al. RNA
- miRo: a miRNA knowledge base
- (2009) A. Lagana et al. Database-The Journal of Biological Databases and Curation
- A novel and universal method for microRNA RT-qPCR data normalization
- (2009) Pieter Mestdagh et al. GENOME BIOLOGY
- Technical variables in high-throughput miRNA expression profiling: Much work remains to be done
- (2008) P NELSON et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Focus on RNA isolation: Obtaining RNA for microRNA (miRNA) expression profiling analyses of neural tissue
- (2008) W WANG et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Measuring microRNAs: Comparisons of microarray and quantitative PCR measurements, and of different total RNA prep methods
- (2008) Robert A Ach et al. BMC BIOTECHNOLOGY
- Detection of elevated levels of tumour-associated microRNAs in serum of patients with diffuse large B-cell lymphoma
- (2008) Charles H. Lawrie et al. BRITISH JOURNAL OF HAEMATOLOGY
- Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases
- (2008) Xi Chen et al. CELL RESEARCH
- Evaluation and Validation of Total RNA Extraction Methods for MicroRNA Expression Analyses in Formalin-Fixed, Paraffin-Embedded Tissues
- (2008) Martina Doleshal et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- MicroRNAs accurately identify cancer tissue origin
- (2008) Nitzan Rosenfeld et al. NATURE BIOTECHNOLOGY
- Direct multiplexed measurement of gene expression with color-coded probe pairs
- (2008) Gary K Geiss et al. NATURE BIOTECHNOLOGY
- MicroRNA expression profiling using microarrays
- (2008) Chang-Gong Liu et al. Nature Protocols
- Direct detection of small RNAs using splinted ligation
- (2008) Patricia A Maroney et al. Nature Protocols
- Quality Assessment and Data Analysis for microRNA Expression Arrays
- (2008) D. Sarkar et al. NUCLEIC ACIDS RESEARCH
- miR2Disease: a manually curated database for microRNA deregulation in human disease
- (2008) Q. Jiang et al. NUCLEIC ACIDS RESEARCH
- Circulating microRNAs as stable blood-based markers for cancer detection
- (2008) P. S. Mitchell et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Normalization of microRNA expression levels in quantitative RT-PCR assays: Identification of suitable reference RNA targets in normal and cancerous human solid tissues
- (2008) H. J. Peltier et al. RNA
- Profiling microRNA expression with microarrays
- (2008) James Q. Yin et al. TRENDS IN BIOTECHNOLOGY
- MicroRNAs, the immune system and rheumatic disease
- (2008) Esmerina Tili et al. Nature clinical practice. Rheumatology
- Multiplexed Detection Methods for Profiling MicroRNA Expression in Biological Samples
- (2007) Alastair W. Wark et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Real-time PCR quantification of precursor and mature microRNA
- (2007) Thomas D. Schmittgen et al. METHODS
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