Morphisms of reaction networks that couple structure to function

A Stronger Necessary Condition for the Multistationarity of Chemical Reaction Networks

(2013) Sylvain Soliman   BULLETIN OF MATHEMATICAL BIOLOGY

Simplifying biochemical models with intermediate species

(2013) E. Feliu et al.   Journal of the Royal Society Interface

Programmable chemical controllers made from DNA

(2013) Yuan-Jyue Chen et al.   Nature Nanotechnology

The PAR network: redundancy and robustness in a symmetry-breaking system

(2013) F. Motegi et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Molecular mechanisms creating bistable switches at cell cycle transitions

(2013) A. Verdugo et al.   Open Biology

Design Principles of the Yeast G1/S Switch

(2013) Xiaojing Yang et al.   PLOS BIOLOGY

Dynamics of SIN Asymmetry Establishment

(2013) Archana Bajpai et al.   PLoS Computational Biology

Patterning embryos with oscillations: structure, function and dynamics of the vertebrate segmentation clock

(2012) A. C. Oates et al.   DEVELOPMENT

Functional Motifs in Biochemical Reaction Networks

(2010) John J. Tyson et al.   Annual Review of Physical Chemistry

A graphical method for reducing and relating models in systems biology

(2010) S. Gay et al.   BIOINFORMATICS

What is flux balance analysis?

(2010) Jeffrey D Orth et al.   NATURE BIOTECHNOLOGY

DNA as a universal substrate for chemical kinetics

(2010) D. Soloveichik et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Robust Stochastic Chemical Reaction Networks and Bounded Tau-Leaping

(2009) David Soloveichik   JOURNAL OF COMPUTATIONAL BIOLOGY