Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys

The Importance of Gut Symbionts in the Development of the Brown Marmorated Stink Bug, Halyomorpha halys (Stål)

(2014) Christopher M. Taylor et al.   PLoS One

Transcriptome Analysis of Houttuynia cordata Thunb. by Illumina Paired-End RNA Sequencing and SSR Marker Discovery

(2014) Lin Wei et al.   PLoS One

Analysis and annotation of the hexaploid oat seed transcriptome

(2013) Juan J Gutierrez-Gonzalez et al.   BMC GENOMICS

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Transcriptome Analysis and Screening for Potential Target Genes for RNAi-Mediated Pest Control of the Beet Armyworm, Spodoptera exigua

(2013) Hang Li et al.   PLoS One

Gene Expression in Gut Symbiotic Organ of Stinkbug Affected by Extracellular Bacterial Symbiont

(2013) Ryo Futahashi et al.   PLoS One

A quantitative reference transcriptome for Nematostella vectensis early embryonic development: a pipeline for de novo assembly in emerging model systems

(2013) Sarah Tulin et al.   EvoDevo

Bacteria-Human Somatic Cell Lateral Gene Transfer Is Enriched in Cancer Samples

(2013) David R. Riley et al.   PLoS Computational Biology

Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics

(2012) Dapeng Zhang et al.   Biology Direct

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

TIGRFAMs and Genome Properties in 2013

(2012) Daniel H. Haft et al.   NUCLEIC ACIDS RESEARCH

Global Transcriptome Profiling of the Pine Shoot Beetle, Tomicus yunnanensis (Coleoptera: Scolytinae)

(2012) Jia-Ying Zhu et al.   PLoS One

Potential Geographic Distribution of Brown Marmorated Stink Bug Invasion (Halyomorpha halys)

(2012) Gengping Zhu et al.   PLoS One

Adaptive horizontal transfer of a bacterial gene to an invasive insect pest of coffee

(2012) R. Acuna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative Genomics Suggests an Independent Origin of Cytoplasmic Incompatibility in Cardinium hertigii

(2012) Thomas Penz et al.   PLoS Genetics

Symbiont of the stink bug Plautia stali synthesizes rough-type lipopolysaccharide

(2011) Hideaki Kobayashi et al.   MICROBIOLOGICAL RESEARCH

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Origins of theE. coliStrain Causing an Outbreak of Hemolytic–Uremic Syndrome in Germany

(2011) David A. Rasko et al.   NEW ENGLAND JOURNAL OF MEDICINE

The IGS Standard Operating Procedure for Automated Prokaryotic Annotation

(2011) Kevin Galens et al.   Standards in Genomic Sciences

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

De novo characterization of a whitefly transcriptome and analysis of its gene expression during development

(2010) Xiao-Wei Wang et al.   BMC GENOMICS

Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species

(2010) J. H. Werren et al.   SCIENCE

Genome Sequence of the Pea Aphid Acyrthosiphon pisum

(2010)   PLOS BIOLOGY

Bacterial Genes in the Aphid Genome: Absence of Functional Gene Transfer from Buchnera to Its Host

(2010) Naruo Nikoh et al.   PLoS Genetics

Immunity and other defenses in pea aphids, Acyrthosiphon pisum

(2010) Nicole M Gerardo et al.   GENOME BIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Aphids acquired symbiotic genes via lateral gene transfer

(2009) Naruo Nikoh et al.   BMC BIOLOGY

Horizontal gene transfer between Wolbachia and the mosquito Aedes aegypti

(2009) Lisa Klasson et al.   BMC GENOMICS

The Genome of the Amoeba Symbiont "Candidatus Amoebophilus asiaticus" Reveals Common Mechanisms for Host Cell Interaction among Amoeba-Associated Bacteria

(2009) S. Schmitz-Esser et al.   JOURNAL OF BACTERIOLOGY

Seasonal Occurrence and Impact of Halyomorpha halys (Hemiptera: Pentatomidae) in Tree Fruit

(2009) Anne L. Nielsen et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont

(2009) Z. L. Sabree et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Wounding-mediated gene expression and accelerated viviparous reproduction of the pea aphidAcyrthosiphon pisum

(2008) B. Altincicek et al.   INSECT MOLECULAR BIOLOGY

Toxicity of Insecticides to Halyomorpha halys (Hemiptera: Pentatomidae) Using Glass-Vial Bioassays

(2008) Anne L. Nielsen et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

An Ancient Horizontal Gene Transfer between Mosquito and the Endosymbiotic Bacterium Wolbachia pipientis

(2008) Megan Woolfit et al.   MOLECULAR BIOLOGY AND EVOLUTION