Human-induced evolution caught in action: SNP-array reveals rapid amphi-atlantic spread of pesticide resistance in the salmon ecotoparasite Lepeophtheirus salmonis

Salmon lice increase the age of returning Atlantic salmon

(2014) K. W. Vollset et al.   Biology Letters

A common-garden experiment to quantify evolutionary processes in copepods: the case of emamectin benzoate resistance in the parasitic sea louse Lepeophtheirus salmonis

(2014) Lina Eva Ljungfeldt et al.   BMC EVOLUTIONARY BIOLOGY

Detection of selective sweeps in cattle using genome-wide SNP data

(2013) Holly R Ramey et al.   BMC GENOMICS

Salmon lice (Lepeophtheirus salmonis) showing varying emamectin benzoate susceptibilities differ in neuronal acetylcholine receptor and GABA-gated chloride channel mRNA expression

(2013) Stephen N Carmichael et al.   BMC GENOMICS

Detection of emamectin benzoate tolerance emergence in different life stages of sea lice,Lepeophtheirus salmonis, on farmed Atlantic salmon,Salmo salarL

(2013) P G Jones et al.   JOURNAL OF FISH DISEASES

Salmon lice - impact on wild salmonids and salmon aquaculture

(2013) O Torrissen et al.   JOURNAL OF FISH DISEASES

SweeD: Likelihood-Based Detection of Selective Sweeps in Thousands of Genomes

(2013) Pavlos Pavlidis et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genetic Hitchhiking under Heterogeneous Spatial Selection Pressures

(2013) Kristan A. Schneider et al.   PLoS One

ParallelStructure: A R Package to Distribute Parallel Runs of the Population Genetics Program STRUCTURE on Multi-Core Computers

(2013) Francois Besnier et al.   PLoS One

Genome-Wide Analysis Reveals Selection for Important Traits in Domestic Horse Breeds

(2013) Jessica L. Petersen et al.   PLoS Genetics

OmegaPlus: a scalable tool for rapid detection of selective sweeps in whole-genome datasets

(2012) N. Alachiotis et al.   BIOINFORMATICS

Gene expression in Atlantic salmon skin in response to infection with the parasitic copepod Lepeophtheirus salmonis, cortisol implant, and their combination

(2012) Aleksei Krasnov et al.   BMC GENOMICS

Inferences of Demography and Selection in an African Population of Drosophila melanogaster

(2012) N. D. Singh et al.   GENETICS

Life history and virulence are linked in the ectoparasitic salmon louse Lepeophtheirus salmonis

(2012) A. MENNERAT et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Footprints of positive selection associated with a mutation (N1575Y) in the voltage-gated sodium channel of Anopheles gambiae

(2012) C. M. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Major Genome Region Underlying Artemisinin Resistance in Malaria

(2012) I. H. Cheeseman et al.   SCIENCE

A selective sweep of >8 Mb on chromosome 26 in the Boxer genome

(2011) Javier Quilez et al.   BMC GENOMICS

Molecular cloning and characterisation of a novel P-glycoprotein in the salmon louse Lepeophtheirus salmonis

(2011) Jan Heumann et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGY

Technical note: Modifying Atlantic salmon (Salmo salar) jumping behavior to facilitate innovation of parasitic sea lice control techniques1

(2011) T. Dempster et al.   JOURNAL OF ANIMAL SCIENCE

Effects of parasites from salmon farms on productivity of wild salmon

(2011) M. Krkosek et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution in Action: Plants Resistant to Herbicides

(2010) Stephen B. Powles et al.   Annual Review of Plant Biology

MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus

(2010) Gregory Ewing et al.   BIOINFORMATICS

Searching for Footprints of Positive Selection in Whole-Genome SNP Data From Nonequilibrium Populations

(2010) P. Pavlidis et al.   GENETICS

Field, Genetic, and Modeling Approaches Show Strong Positive Selection Acting upon an Insecticide Resistance Mutation in Anopheles gambiae s.s.

(2010) A. Lynd et al.   MOLECULAR BIOLOGY AND EVOLUTION

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Genome-Wide Effects of Long-Term Divergent Selection

(2010) Anna M. Johansson et al.   PLoS Genetics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Signals of recent positive selection in a worldwide sample of human populations

(2009) J. K. Pickrell et al.   GENOME RESEARCH

Detecting loci under selection in a hierarchically structured population

(2009) L Excoffier et al.   HEREDITY

The global economic cost of sea lice to the salmonid farming industry

(2009) Mark J Costello   JOURNAL OF FISH DISEASES

Establishment and characterisation of salmon louse (Lepeophtheirus salmonis (Krøyer 1837)) laboratory strains

(2009) Lars A. Hamre et al.   PARASITOLOGY INTERNATIONAL

Hitchhiking and Selective Sweeps of Plasmodium falciparum Sulfadoxine and Pyrimethamine Resistance Alleles in a Population from Central Africa

(2008) A. M. McCollum et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Using native and syntenically mapped cDNA alignments to improve de novo gene finding

(2008) Mario Stanke et al.   BIOINFORMATICS

LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method

(2008) Tiago Antao et al.   BMC BIOINFORMATICS

Local and systemic gene expression responses of Atlantic salmon (Salmo salar L.) to infection with the salmon louse (Lepeophtheirus salmonis)

(2008) Stanko Skugor et al.   BMC GENOMICS

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

ldne: a program for estimating effective population size from data on linkage disequilibrium

(2008) ROBIN S. WAPLES et al.   Molecular Ecology Resources

An Approximate Bayesian Estimator Suggests Strong, Recurrent Selective Sweeps in Drosophila

(2008) Jeffrey D. Jensen et al.   PLoS Genetics