Uncovering the genetic basis for early isogamete differentiation: a case study of Ectocarpus siliculosus

Sex-biased gene expression in the brown alga Fucus vesiculosus

(2013) Maria João F Martins et al.   BMC GENOMICS

The Ras protein superfamily: Evolutionary tree and role of conserved amino acids

(2012) Ana Maria Rojas et al.   JOURNAL OF CELL BIOLOGY

Evolution of sex and mating loci: An expanded view from Volvocine algae

(2011) James G Umen   CURRENT OPINION IN MICROBIOLOGY

Target of Rapamycin (TOR) in Nutrient Signaling and Growth Control

(2011) Robbie Loewith et al.   GENETICS

Highly Dynamic Exon Shuffling in Candidate Pathogen Receptors ... What if Brown Algae Were Capable of Adaptive Immunity?

(2011) A. Zambounis et al.   MOLECULAR BIOLOGY AND EVOLUTION

ETOILERegulates Developmental Patterning in the Filamentous Brown AlgaEctocarpus siliculosus

(2011) Aude Le Bail et al.   PLANT CELL

Next generation sequencing in functional genomics

(2010) T. Werner   BRIEFINGS IN BIOINFORMATICS

Arabidopsis Female Gametophyte Gene Expression Map Reveals Similarities between Plant and Animal Gametes

(2010) Samuel E. Wuest et al.   CURRENT BIOLOGY

piRNAs, transposon silencing, andDrosophilagermline development

(2010) Jaspreet S. Khurana et al.   JOURNAL OF CELL BIOLOGY

A multi-locus time-calibrated phylogeny of the brown algae (Heterokonta, Ochrophyta, Phaeophyceae): Investigating the evolutionary nature of the “brown algal crown radiation”

(2010) Thomas Silberfeld et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

(2010) J. Mark Cock et al.   NATURE

Genetic diversity of Ectocarpus (Ectocarpales, Phaeophyceae) in Peru and northern Chile, the area of origin of the genome-sequenced strain

(2010) Akira F. Peters et al.   NEW PHYTOLOGIST

The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

Transcription factor families inferred from genome sequences of photosynthetic stramenopiles

(2010) Edda Rayko et al.   NEW PHYTOLOGIST

Distinct Gene Expression Profiles in Egg and Synergid Cells of Rice as Revealed by Cell Type-Specific Microarrays

(2010) T. Ohnishi et al.   PLANT PHYSIOLOGY

Evolution of an Expanded Sex-Determining Locus in Volvox

(2010) P. Ferris et al.   SCIENCE

Expressed sequence-tag analysis of tobacco sperm cells reveals a unique transcriptional profile and selective persistence of paternal transcripts after fertilization

(2010) Hai-Ping Xin et al.   SEXUAL PLANT REPRODUCTION

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Origin and evolution of the Notch signalling pathway: an overview from eukaryotic genomes

(2009) Eve Gazave et al.   BMC EVOLUTIONARY BIOLOGY

SHRiMP: Accurate Mapping of Short Color-space Reads

(2009) Stephen M. Rumble et al.   PLoS Computational Biology

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

(2009) Simon M Dittami et al.   GENOME BIOLOGY

Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif

(2008) Thomas R Bürglin   BMC GENOMICS

Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus

(2008) Aude Le Bail et al.   BMC MOLECULAR BIOLOGY

Sperm-activating peptides in the regulation of ion fluxes, signal transduction and motility

(2008) Alberto Darszon et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Comparative Transcriptomics of Arabidopsis Sperm Cells

(2008) F. Borges et al.   PLANT PHYSIOLOGY

Ca2+ bursts occur around a local minimal concentration of attractant and trigger sperm chemotactic response

(2008) K. Shiba et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative analysis of oocyte transcript profiles reveals a high degree of conservation among species

(2008) M. Vallee et al.   REPRODUCTION