MHC2SKpan: a novel kernel based approach for pan-specific MHC class II peptide binding prediction

TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules

(2012) Lianming Zhang et al.   PLoS One

Toward more accurate pan-specific MHC-peptide binding prediction: a review of current methods and tools

(2011) L. Zhang et al.   BRIEFINGS IN BIOINFORMATICS

Exploiting physico-chemical properties in string kernels

(2010) Nora C Toussaint et al.   BMC BIOINFORMATICS

Prediction of the binding affinities of peptides to class II MHC using a regularized thermodynamic model

(2010) Andrew J Bordner et al.   BMC BIOINFORMATICS

Peptide binding predictions for HLA DR, DP and DQ molecules

(2010) Peng Wang et al.   BMC BIOINFORMATICS

MHC Class II epitope predictive algorithms

(2010) Morten Nielsen et al.   IMMUNOLOGY

Ensemble approaches for improving HLA Class I-peptide binding prediction

(2010) Xihao Hu et al.   JOURNAL OF IMMUNOLOGICAL METHODS

The IMGT/HLA database

(2010) J. Robinson et al.   NUCLEIC ACIDS RESEARCH

NN-align. An artificial neural network-based alignment algorithm for MHC class II peptide binding prediction

(2009) Morten Nielsen et al.   BMC BIOINFORMATICS

The Immune Epitope Database 2.0

(2009) Randi Vita et al.   NUCLEIC ACIDS RESEARCH

Shift-Invariant Adaptive Double Threading: Learning MHC II–Peptide Binding

(2008) Noah Zaitlen et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Quantitative Predictions of Peptide Binding to Any HLA-DR Molecule of Known Sequence: NetMHCIIpan

(2008) Morten Nielsen et al.   PLoS Computational Biology