TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules
Published 2012 View Full Article
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Title
TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules
Authors
Keywords
Major histocompatibility complex, Sequence motif analysis, T cells, Artificial neural networks, Machine learning, Arginine, Sequence databases, Vaccine development
Journal
PLoS One
Volume 7, Issue 2, Pages e30483
Publisher
Public Library of Science (PLoS)
Online
2012-02-24
DOI
10.1371/journal.pone.0030483
References
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Related references
Note: Only part of the references are listed.- Dana-Farber repository for machine learning in immunology
- (2011) Guang Lan Zhang et al. JOURNAL OF IMMUNOLOGICAL METHODS
- Prediction of the binding affinities of peptides to class II MHC using a regularized thermodynamic model
- (2010) Andrew J Bordner et al. BMC BIOINFORMATICS
- MultiRTA: A simple yet reliable method for predicting peptide binding affinities for multiple class II MHC allotypes
- (2010) Andrew J. Bordner et al. BMC BIOINFORMATICS
- MHC Class II epitope predictive algorithms
- (2010) Morten Nielsen et al. IMMUNOLOGY
- The IMGT/HLA database
- (2010) J. Robinson et al. NUCLEIC ACIDS RESEARCH
- Nomenclature for factors of the HLA system, 2010
- (2010) S. G. E. Marsh et al. TISSUE ANTIGENS
- The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding
- (2009) Hao Zhang et al. BIOINFORMATICS
- NN-align. An artificial neural network-based alignment algorithm for MHC class II peptide binding prediction
- (2009) Morten Nielsen et al. BMC BIOINFORMATICS
- The Immune Epitope Database 2.0
- (2009) Randi Vita et al. NUCLEIC ACIDS RESEARCH
- Pan-specific MHC class I predictors: a benchmark of HLA class I pan-specific prediction methods
- (2008) Hao Zhang et al. BIOINFORMATICS
- Evaluation of MHC-II peptide binding prediction servers: applications for vaccine research
- (2008) Hong Lin et al. BMC BIOINFORMATICS
- Evaluation of MHC class I peptide binding prediction servers: Applications for vaccine research
- (2008) Hong Lin et al. BMC IMMUNOLOGY
- Shift-Invariant Adaptive Double Threading: Learning MHC II–Peptide Binding
- (2008) Noah Zaitlen et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Quantitative Predictions of Peptide Binding to Any HLA-DR Molecule of Known Sequence: NetMHCIIpan
- (2008) Morten Nielsen et al. PLoS Computational Biology
- A Systematic Assessment of MHC Class II Peptide Binding Predictions and Evaluation of a Consensus Approach
- (2008) Peng Wang et al. PLoS Computational Biology
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