Genome sequencing and genetic breeding of a bioethanol Saccharomyces cerevisiae strain YJS329

Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments

(2012) B. Dunn et al.   GENOME RESEARCH

Molecular mechanisms of yeast tolerance and in situ detoxification of lignocellulose hydrolysates

(2011) Z. Lewis Liu   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Techno-economic implications of improved high gravity corn mash fermentation

(2011) Arthur Kollaras et al.   BIORESOURCE TECHNOLOGY

Stress-related challenges in pentose fermentation to ethanol by the yeast Saccharomyces cerevisiae

(2011) João R. M. Almeida et al.   Biotechnology Journal

Whole-Genome Sequencing of Sake Yeast Saccharomyces cerevisiae Kyokai no. 7

(2011) T. Akao et al.   DNA RESEARCH

Whole-Genome Comparison Reveals Novel Genetic Elements That Characterize the Genome of Industrial Strains of Saccharomyces cerevisiae

(2011) Anthony R. Borneman et al.   PLoS Genetics

A Genetic and Structural Study of Genome Rearrangements Mediated by High Copy Repeat Ty1 Elements

(2011) Jason E. Chan et al.   PLoS Genetics

Selection of stress-tolerant yeasts for simultaneous saccharification and fermentation (SSF) of very high gravity (VHG) potato mash to ethanol

(2010) Takashi Watanabe et al.   BIORESOURCE TECHNOLOGY

Comparative transcriptome profiling analyses during the lag phase uncover YAP1, PDR1, PDR3, RPN4, and HSF1 as key regulatory genes in genomic adaptation to the lignocellulose derived inhibitor HMF for Saccharomyces cerevisiae

(2010) Menggen Ma et al.   BMC GENOMICS

Natural selection on cis and trans regulation in yeasts

(2010) J. J. Emerson et al.   GENOME RESEARCH

Genome-wide identification of genes involved in tolerance to various environmental stresses inSaccharomyces cerevisiae

(2010) C. Auesukaree et al.   JOURNAL OF APPLIED GENETICS

Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing

(2010) Bin Wang et al.   NUCLEIC ACIDS RESEARCH

Genotype to Phenotype: A Complex Problem

(2010) R. D. Dowell et al.   SCIENCE

High-temperature fermentation: how can processes for ethanol production at high temperatures become superior to the traditional process using mesophilic yeast?

(2009) Babiker M. A. Abdel-Banat et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production

(2009) J. L. Argueso et al.   GENOME RESEARCH

Population genomics of domestic and wild yeasts

(2009) Gianni Liti et al.   NATURE

Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118

(2009) M. Novo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative genome analysis of aSaccharomyces cerevisiaewine strain

(2008) Anthony R. Borneman et al.   FEMS YEAST RESEARCH

Structure and function of a transcriptional network activated by the MAPK Hog1

(2008) Andrew P Capaldi et al.   NATURE GENETICS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Double-strand breaks associated with repetitive DNA can reshape the genome

(2008) J. L. Argueso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Variations in Stress Sensitivity and Genomic Expression in Diverse S. cerevisiae Isolates

(2008) Daniel J. Kvitek et al.   PLoS Genetics

A Catalog of Neutral and Deleterious Polymorphism in Yeast

(2008) Scott W. Doniger et al.   PLoS Genetics