Comparative analyses imply that the enigmatic sigma factor 54 is a central controller of the bacterial exterior

Regulation of Type VI Secretion Gene Clusters by  54 and Cognate Enhancer Binding Proteins

(2011) C. S. Bernard et al.   JOURNAL OF BACTERIOLOGY

Regulation of the co-evolved HrpR and HrpS AAA+ proteins required for Pseudomonas syringae pathogenicity

(2011) Milija Jovanovic et al.   Nature Communications

Sensor domains of two-component regulatory systems

(2010) Jonah Cheung et al.   CURRENT OPINION IN MICROBIOLOGY

Lack of CbrB in Pseudomonas putida affects not only amino acids metabolism but also different stress responses and biofilm development

(2010) Cristina I. Amador et al.   ENVIRONMENTAL MICROBIOLOGY

Cell envelope architecture in the Chloroflexi: a shifting frontline in a phylogenetic turf war

(2010) Iain C. Sutcliffe   ENVIRONMENTAL MICROBIOLOGY

The role of the Fe-S cluster in the sensory domain of nitrogenase transcriptional activator VnfA from Azotobacter vinelandii

(2010) Hiroshi Nakajima et al.   FEBS Journal

The complexity of the ‘simple’ two-component system KdpD/KdpE inEscherichia coli

(2010) Ralf Heermann et al.   FEMS MICROBIOLOGY LETTERS

Lipoproteins of Bacterial Pathogens

(2010) A. Kovacs-Simon et al.   INFECTION AND IMMUNITY

The Phosphoenolpyruvate Phosphotransferase System: as Important for Biofilm Formation by Vibrio cholerae as It Is for Metabolism in Escherichia coli

(2010) B. A. Lazazzera   JOURNAL OF BACTERIOLOGY

The Phosphoenolpyruvate Phosphotransferase System Regulates Vibrio cholerae Biofilm Formation through Multiple Independent Pathways

(2010) L. Houot et al.   JOURNAL OF BACTERIOLOGY

Structure and Functional Analysis of LptC, a Conserved Membrane Protein Involved in the Lipopolysaccharide Export Pathway inEscherichia coli

(2010) An X. Tran et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Choline catabolism, σ54 factor and NtrC are required for the full expression of the Pseudomonas aeruginosa phosphorylcholine phosphatase gene

(2010) Maria J. Massimelli et al.   MICROBIOLOGICAL RESEARCH

Novel  B regulation modules of Gram-positive bacteria involve the use of complex hybrid histidine kinases

(2010) M. de Been et al.   MICROBIOLOGY-SGM

Antagonistic regulation of motility and transcriptome expression by RpoN and RpoS in Escherichia coli

(2010) Tao Dong et al.   MOLECULAR MICROBIOLOGY

A field guide to bacterial swarming motility

(2010) Daniel B. Kearns   NATURE REVIEWS MICROBIOLOGY

Common and divergent features in transcriptional control of the homologous small RNAs GlmY and GlmZ in Enterobacteriaceae

(2010) Yvonne Göpel et al.   NUCLEIC ACIDS RESEARCH

A link between the assembly of flagella and lipooligosaccharide of the Gram-negative bacterium Campylobacter jejuni

(2010) T. W. Cullen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A phylum level perspective on bacterial cell envelope architecture

(2010) Iain C. Sutcliffe   TRENDS IN MICROBIOLOGY

Regulatory roles of the bacterial nitrogen-related phosphotransferase system

(2010) Katharina Pflüger-Grau et al.   TRENDS IN MICROBIOLOGY

Signal transduction and adaptive regulation through bacterial two-component systems: the Escherichia coli AtoSC paradigm

(2009) Dimitrios A. Kyriakidis et al.   AMINO ACIDS

Genomic Analysis of "Elusimicrobium minutum," the First Cultivated Representative of the Phylum "Elusimicrobia" (Formerly Termite Group 1)

(2009) D. P. R. Herlemann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Ultramicrobacterium "Elusimicrobium minutum" gen. nov., sp. nov., the First Cultivated Representative of the Termite Group 1 Phylum

(2009) O. Geissinger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogenesis of Outer Membranes in Gram-Negative Bacteria

(2009) Hajime TOKUDA   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens

(2009) Ching Leang et al.   BMC GENOMICS

Finding sequence motifs in prokaryotic genomes--a brief practical guide for a microbiologist

(2009) J. Mrazek   BRIEFINGS IN BIOINFORMATICS

Wall Teichoic Acid Function, Biosynthesis, and Inhibition

(2009) Jonathan G. Swoboda et al.   CHEMBIOCHEM

Bacterial nucleotide-based second messengers

(2009) Christina Pesavento et al.   CURRENT OPINION IN MICROBIOLOGY

Identification and analysis of the osmotolerance associated genes inListeria monocytogenes

(2009) Y. Okada et al.   Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Risk Assessment

Participatory Visualization with Wordle

(2009) F.B. Viegas et al.   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

Evaluation of the phylogenetic position of the sulfate-reducing bacterium Thermodesulfovibrio yellowstonii (phylum Nitrospirae) by means of gene order data from completely sequenced genomes

(2009) T. Kunisawa   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

An Alternative Route for Recycling of N-Acetylglucosamine from Peptidoglycan Involves the N-Acetylglucosamine Phosphotransferase System in Escherichia coli

(2009) J. Plumbridge   JOURNAL OF BACTERIOLOGY

Indole Acts as an Extracellular Cue Regulating Gene Expression in Vibrio cholerae

(2009) R. S. Mueller et al.   JOURNAL OF BACTERIOLOGY

Structure and Regulation of the gab Gene Cluster, Involved in the  -Aminobutyric Acid Shunt, Are Controlled by a  54 Factor in Bacillus thuringiensis

(2009) L. Zhu et al.   JOURNAL OF BACTERIOLOGY

Extracytoplasmic PAS-Like Domains Are Common in Signal Transduction Proteins

(2009) C. Chang et al.   JOURNAL OF BACTERIOLOGY

Flagellar Biogenesis of Xanthomonas campestris Requires the Alternative Sigma Factors RpoN2 and FliA and Is Temporally Regulated by FlhA, FlhB, and FlgM

(2009) T.-C. Yang et al.   JOURNAL OF BACTERIOLOGY

Receiver Domains Control the Active-State Stoichiometry of Aquifex aeolicus σ54 Activator NtrC4, as Revealed by Electrospray Ionization Mass Spectrometry

(2009) Joseph D. Batchelor et al.   JOURNAL OF MOLECULAR BIOLOGY

Signals, Regulatory Networks, and Materials That Build and Break Bacterial Biofilms

(2009) E. Karatan et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

 54-mediated control of the mannose phosphotransferase sytem in Lactobacillus plantarum impacts on carbohydrate metabolism

(2009) M. J. A. Stevens et al.   MICROBIOLOGY-SGM

Inactivation of alternative sigma factor 54 (RpoN) leads to increased acid resistance, and alters locus of enterocyte effacement (LEE) expression in Escherichia coli O157 : H7

(2009) J. T. Riordan et al.   MICROBIOLOGY-SGM

Dual control by perfectly overlapping σ54- and σ70-promoters adjusts small RNA GlmY expression to different environmental signals

(2009) Birte Reichenbach et al.   MOLECULAR MICROBIOLOGY

Role of NtrC-regulated exopolysaccharides in the biofilm formation and pathogenic interaction ofVibrio vulnificus

(2009) Han-Suk Kim et al.   MOLECULAR MICROBIOLOGY

An intricate network of regulators controls biofilm formation and colonization byVibrio fischeri

(2009) Karen L. Visick   MOLECULAR MICROBIOLOGY

The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) σ factor protein family

(2009) Anna Staroń et al.   MOLECULAR MICROBIOLOGY

Structural and mechanistic determinants of c-di-GMP signalling

(2009) Tilman Schirmer et al.   NATURE REVIEWS MICROBIOLOGY

Construction and functional analyses of a comprehensive σ54 site-directed mutant library using alanine–cysteine mutagenesis

(2009) Yan Xiao et al.   NUCLEIC ACIDS RESEARCH

Essential roles of three enhancer sites in σ54-dependent transcription by the nitric oxide sensing regulatory protein NorR

(2009) Nicholas P. Tucker et al.   NUCLEIC ACIDS RESEARCH

The role of the conserved phenylalanine in the σ54-interacting GAFTGA motif of bacterial enhancer binding proteins

(2009) Nan Zhang et al.   NUCLEIC ACIDS RESEARCH

Promoter and regulon analysis of nitrogen assimilation factor, σ54, reveal alternative strategy for E. coli MG1655 flagellar biosynthesis

(2009) Kai Zhao et al.   NUCLEIC ACIDS RESEARCH

Deep phylogeny, ancestral groups and the four ages of life

(2009) T. Cavalier-Smith   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales

(2009) O. Zhaxybayeva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The two-component system QseEF and the membrane protein QseG link adrenergic and stress sensing to bacterial pathogenesis

(2009) N. C. Reading et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proteolysis of σS (RpoS) and the general stress response in Escherichia coli

(2009) Regine Hengge   RESEARCH IN MICROBIOLOGY

Sense and sensibility: flagellum-mediated gene regulation

(2009) Jennifer K. Anderson et al.   TRENDS IN MICROBIOLOGY

A Novel Signaling Network Essential for Regulating Pseudomonas aeruginosa Biofilm Development

(2009) Olga E. Petrova et al.   PLoS Pathogens

Ralstonia eutropha H16 Flagellation Changes According to Nutrient Supply and State of Poly(3-Hydroxybutyrate) Accumulation

(2008) M. Raberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unraveling the evolutionary history of the phosphoryl-transfer chain of the phosphoenolpyruvate:phosphotransferase system through phylogenetic analyses and genome context

(2008) Iñaki Comas et al.   BMC EVOLUTIONARY BIOLOGY

A generic approach to identify Transcription Factor-specific operator motifs; Inferences for LacI-family mediated regulation in Lactobacillus plantarum WCFS1

(2008) Christof Francke et al.   BMC GENOMICS

Inverse regulatory coordination of motility and curli-mediated adhesion in Escherichia coli

(2008) C. Pesavento et al.   GENES & DEVELOPMENT

Burkholderia cenocepacia Requires the RpoN Sigma Factor for Biofilm Formation and Intracellular Trafficking within Macrophages

(2008) M. S. Saldias et al.   INFECTION AND IMMUNITY

Functional Analysis of the Protein Machinery Required for Transport of Lipopolysaccharide to the Outer Membrane of Escherichia coli

(2008) P. Sperandeo et al.   JOURNAL OF BACTERIOLOGY

Growth Phase- and Cell Division-Dependent Activation and Inactivation of the  32 Regulon in Escherichia coli

(2008) M. A. Wagner et al.   JOURNAL OF BACTERIOLOGY

Role of HPF (Hibernation Promoting Factor) in Translational Activity in Escherichia coli

(2008) Masami Ueta et al.   JOURNAL OF BIOCHEMISTRY

Structure and Regulatory Mechanism of Aquifex aeolicus NtrC4: Variability and Evolution in Bacterial Transcriptional Regulation

(2008) Joseph D. Batchelor et al.   JOURNAL OF MOLECULAR BIOLOGY

The HupR Receiver Domain Crystal Structure in its Nonphospho and Inhibitory Phospho States

(2008) Karen M. Davies et al.   JOURNAL OF MOLECULAR BIOLOGY

Transcriptional interplay among the regulators Rrp2, RpoN and RpoS in Borrelia burgdorferi

(2008) Z. Ouyang et al.   MICROBIOLOGY-SGM

Modus operandi of the bacterial RNA polymerase containing the σ54promoter-specificity factor

(2008) Sivaramesh Wigneshweraraj et al.   MOLECULAR MICROBIOLOGY

iPath: interactive exploration of biochemical pathways and networks

(2008) Ivica Letunic et al.   TRENDS IN BIOCHEMICAL SCIENCES