Genomic sequencing and analysis of a Chinese hamster ovary cell line using Illumina sequencing technology

From SNPs to functional polymorphism: The insight into biotechnology applications

(2010) Pei-Yu Liao et al.   BIOCHEMICAL ENGINEERING JOURNAL

Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing

(2010) Fabian Birzele et al.   NUCLEIC ACIDS RESEARCH

Combining Next-Generation Sequencing Strategies for Rapid Molecular Resource Development from an Invasive Aphid Species, Aphis glycines

(2010) Xiaodong Bai et al.   PLoS One

Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly

(2009) Bas E. Dutilh et al.   BIOINFORMATICS

MapView: visualization of short reads alignment on a desktop computer

(2009) H. Bao et al.   BIOINFORMATICS

Developing genomic platforms for Chinese hamster ovary cells

(2009) Anne Kantardjieff et al.   BIOTECHNOLOGY ADVANCES

Using microarray technology to select housekeeping genes in Chinese hamster ovary cells

(2009) Scott M. Bahr et al.   BIOTECHNOLOGY AND BIOENGINEERING

Bacterial artificial chromosome library for genome-wide analysis of Chinese hamster ovary cells

(2009) Takeshi Omasa et al.   BIOTECHNOLOGY AND BIOENGINEERING

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey

(2009) Hindrik HD Kerstens et al.   BMC GENOMICS

What can you do with 0.1× genome coverage? A case study based on a genome survey of the scuttle fly Megaselia scalaris (Phoridae)

(2009) David A Rasmussen et al.   BMC GENOMICS

Sensitive and accurate detection of copy number variants using read depth of coverage

(2009) S. Yoon et al.   GENOME RESEARCH

Identification and analysis of specific chromosomal region adjacent to exogenous Dhfr-amplified region in Chinese hamster ovary cell genome

(2009) Joon Young Park et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Computational methods for discovering structural variation with next-generation sequencing

(2009) Paul Medvedev et al.   NATURE METHODS

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Simultaneous alignment of short reads against multiple genomes

(2009) Korbinian Schneeberger et al.   GENOME BIOLOGY

Assisted assembly: how to improve a de novo genome assembly by using related species

(2009) Sante Gnerre et al.   GENOME BIOLOGY

Quality assessment of cross-species hybridization of CHO transcriptome on a mouse DNA oligo microarray

(2008) Joon Chong Yee et al.   BIOTECHNOLOGY AND BIOENGINEERING

Comparative transcriptome analysis to unveil genes affecting recombinant protein productivity in mammalian cells

(2008) Joon Chong Yee et al.   BIOTECHNOLOGY AND BIOENGINEERING

Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome

(2008) Nicole L Quinn et al.   BMC GENOMICS

Mapping short DNA sequencing reads and calling variants using mapping quality scores

(2008) H. Li et al.   GENOME RESEARCH

Next-generation DNA sequencing

(2008) Jay Shendure et al.   NATURE BIOTECHNOLOGY