The discriminant power of RNA features for pre-miRNA recognition

HuntMi: an efficient and taxon-specific approach in pre-miRNA identification

(2013) Adam Gudyś et al.   BMC BIOINFORMATICS

A biophysical miRNA-mRNA interaction model infers canonical and noncanonical targets

(2013) Mohsen Khorshid et al.   NATURE METHODS

Global profiling of miRNAs and the hairpin precursors: insights into miRNA processing and novel miRNA discovery

(2013) Na Li et al.   NUCLEIC ACIDS RESEARCH

Defining and providing robust controls for microRNA prediction

(2012) William Ritchie et al.   BIOINFORMATICS

Integrated Sequence-Structure Motifs Suffice to Identify microRNA Precursors

(2012) Xiuqin Liu et al.   PLoS One

Effects of Aluminum Oxide Nanoparticles on the Growth, Development, and microRNA Expression of Tobacco (Nicotiana tabacum)

(2012) Caitlin E. Burklew et al.   PLoS One

DNACLUST: accurate and efficient clustering of phylogenetic marker genes

(2011) Mohammadreza Ghodsi et al.   BMC BIOINFORMATICS

MIReNA: finding microRNAs with high accuracy and no learning at genome scale and from deep sequencing data

(2010) Anthony Mathelier et al.   BIOINFORMATICS

Predicting microRNA precursors with a generalized Gaussian components based density estimation algorithm

(2010) Chih-Hung Hsieh et al.   BMC BIOINFORMATICS

Non-coding RNA in apicomplexan parasites

(2010) Mariana Matrajt   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

MicroRNA Expression Profiling of Oligodendrocyte Differentiation from Human Embryonic Stem Cells

(2010) Brian S. Letzen et al.   PLoS One

Tracing the evolution of tissue identity with microRNAs

(2010) Katrien De Mulder et al.   GENOME BIOLOGY

microPred: effective classification of pre-miRNAs for human miRNA gene prediction

(2009) Rukshan Batuwita et al.   BIOINFORMATICS

De novo computational prediction of non-coding RNA genes in prokaryotic genomes

(2009) Thao T. Tran et al.   BIOINFORMATICS

The function of non-coding RNAs in genomic imprinting

(2009) M. V. Koerner et al.   DEVELOPMENT

Discovering microRNAs from deep sequencing data using miRDeep

(2008) Marc R Friedländer et al.   NATURE BIOTECHNOLOGY

MicroRNAs and the advent of vertebrate morphological complexity

(2008) A. M. Heimberg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA